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How to install vcfy via python pip




vcfy - Generate VCF file with random variants from reference genome, it belongs to Classifiers:

- Development Status :: 2 - Pre-Alpha
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install vcfy to support your project or you get trouble as ModuleNotFoundError: No module named "vcfy" or ImportError: cannot import name "vcfy" in your project, let follow this tutorial to install vcfy



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_vcfy_env

- Active the virtual environment

test_vcfy_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_vcfy_env

- Active the virtual environment

source test_vcfy_env/bin/active


Step 2: OK, now, let flow below content to start the installation vcfy

To install vcfy on Windows(CMD):

py -m pip install vcfy

To install vcfy on Unix/macOs:

pip install vcfy


Step 3: If you want to install a specific vcfy version, add ==<vcfy version> to the end command line

Example:

pip install vcfy==0.0.1


Please see the version list below table:

VersionReleased dateCommand
vcfy 0.0.92021-04-01T14:46:56Windows:

py -m pip install vcfy==0.0.9

Unix/macOs:

pip install vcfy==0.0.9

vcfy 0.0.82018-11-18T21:06:04Windows:

py -m pip install vcfy==0.0.8

Unix/macOs:

pip install vcfy==0.0.8

vcfy 0.0.72018-08-30T19:18:31Windows:

py -m pip install vcfy==0.0.7

Unix/macOs:

pip install vcfy==0.0.7

vcfy 0.0.62018-07-26T11:28:20Windows:

py -m pip install vcfy==0.0.6

Unix/macOs:

pip install vcfy==0.0.6

vcfy 0.0.52018-06-07T21:19:10Windows:

py -m pip install vcfy==0.0.5

Unix/macOs:

pip install vcfy==0.0.5

vcfy 0.0.42018-05-10T12:01:54Windows:

py -m pip install vcfy==0.0.4

Unix/macOs:

pip install vcfy==0.0.4

vcfy 0.0.32018-05-09T20:27:46Windows:

py -m pip install vcfy==0.0.3

Unix/macOs:

pip install vcfy==0.0.3

vcfy 0.0.22018-05-03T07:49:26Windows:

py -m pip install vcfy==0.0.2

Unix/macOs:

pip install vcfy==0.0.2

vcfy 0.0.12018-05-01T20:52:41Windows:

py -m pip install vcfy==0.0.1

Unix/macOs:

pip install vcfy==0.0.1


Step 4: Otherwise, you can install vcfy from local archives:

Download the distribution file from vcfy-0.0.9.tar.gz or the specific vcfy version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_vcfy_downloaded_file>

On Unix/macOs:

pip install <path_to_vcfy_downloaded_file>


List distribution:


Project link:

- Homepage
- Download