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How to install vcftoolz via python pip




vcftoolz - Tools for working with Variant Call Format files., it belongs to Classifiers:

- Development Status :: 5 - Production/Stable
- Intended Audience :: Science/Research
- License :: Freely Distributable
- Natural Language :: English
- Programming Language :: Python :: 2
- Programming Language :: Python :: 2.7
- Programming Language :: Python :: 3.3
- Programming Language :: Python :: 3.4
- Programming Language :: Python :: 3.5
- Programming Language :: Python :: 3.6
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install vcftoolz to support your project or you get trouble as ModuleNotFoundError: No module named "vcftoolz" or ImportError: cannot import name "vcftoolz" in your project, let follow this tutorial to install vcftoolz



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_vcftoolz_env

- Active the virtual environment

test_vcftoolz_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_vcftoolz_env

- Active the virtual environment

source test_vcftoolz_env/bin/active


Step 2: OK, now, let flow below content to start the installation vcftoolz

To install vcftoolz on Windows(CMD):

py -m pip install vcftoolz

To install vcftoolz on Unix/macOs:

pip install vcftoolz


Step 3: If you want to install a specific vcftoolz version, add ==<vcftoolz version> to the end command line

Example:

pip install vcftoolz==1.0.0


Please see the version list below table:

VersionReleased dateCommand
vcftoolz 1.2.02019-04-04T15:11:51Windows:

py -m pip install vcftoolz==1.2.0

Unix/macOs:

pip install vcftoolz==1.2.0

vcftoolz 1.1.12019-03-26T18:06:13Windows:

py -m pip install vcftoolz==1.1.1

Unix/macOs:

pip install vcftoolz==1.1.1

vcftoolz 1.1.02019-03-05T14:37:26Windows:

py -m pip install vcftoolz==1.1.0

Unix/macOs:

pip install vcftoolz==1.1.0

vcftoolz 1.0.02018-11-20T19:10:29Windows:

py -m pip install vcftoolz==1.0.0

Unix/macOs:

pip install vcftoolz==1.0.0


Step 4: Otherwise, you can install vcftoolz from local archives:

Download the distribution file from vcftoolz-1.2.0.tar.gz or the specific vcftoolz version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_vcftoolz_downloaded_file>

On Unix/macOs:

pip install <path_to_vcftoolz_downloaded_file>


List distribution:


Project link:

- Homepage