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How to install scglue via python pip




scglue - Graph-linked unified embedding for unpaired single-cell multi-omics data integration, it belongs to Classifiers:

- Operating System :: MacOS :: MacOS X
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install scglue to support your project or you get trouble as ModuleNotFoundError: No module named "scglue" or ImportError: cannot import name "scglue" in your project, let follow this tutorial to install scglue



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_scglue_env

- Active the virtual environment

test_scglue_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_scglue_env

- Active the virtual environment

source test_scglue_env/bin/active


Step 2: OK, now, let flow below content to start the installation scglue

To install scglue on Windows(CMD):

py -m pip install scglue

To install scglue on Unix/macOs:

pip install scglue


Step 3: If you want to install a specific scglue version, add ==<scglue version> to the end command line

Example:

pip install scglue==0.1.1


Please see the version list below table:

VersionReleased dateCommand
scglue 0.3.02022-08-17T05:56:14Windows:

py -m pip install scglue==0.3.0

Unix/macOs:

pip install scglue==0.3.0

scglue 0.2.32022-06-21T08:35:59Windows:

py -m pip install scglue==0.2.3

Unix/macOs:

pip install scglue==0.2.3

scglue 0.2.22022-05-21T14:46:18Windows:

py -m pip install scglue==0.2.2

Unix/macOs:

pip install scglue==0.2.2

scglue 0.2.12022-05-02T08:57:15Windows:

py -m pip install scglue==0.2.1

Unix/macOs:

pip install scglue==0.2.1

scglue 0.2.02022-01-25T08:20:46Windows:

py -m pip install scglue==0.2.0

Unix/macOs:

pip install scglue==0.2.0

scglue 0.1.12021-08-25T06:37:27Windows:

py -m pip install scglue==0.1.1

Unix/macOs:

pip install scglue==0.1.1


Step 4: Otherwise, you can install scglue from local archives:

Download the distribution file from scglue-0.3.0.tar.gz or the specific scglue version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_scglue_downloaded_file>

On Unix/macOs:

pip install <path_to_scglue_downloaded_file>


List distribution:


Project link:

- Github