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How to install pyfamsa via python pip




pyfamsa - Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments., it belongs to Classifiers:

- License :: OSI Approved :: GNU General Public License v3 (GPLv3)
- Programming Language :: C
- Programming Language :: Cython
- Programming Language :: Python :: Implementation :: PyPy
- Topic :: Scientific/Engineering :: Bio-Informatics
- Topic :: Scientific/Engineering :: Medical Science Apps.

When you know about this project and you want to new install pyfamsa to support your project or you get trouble as ModuleNotFoundError: No module named "pyfamsa" or ImportError: cannot import name "pyfamsa" in your project, let follow this tutorial to install pyfamsa



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_pyfamsa_env

- Active the virtual environment

test_pyfamsa_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_pyfamsa_env

- Active the virtual environment

source test_pyfamsa_env/bin/active


Step 2: OK, now, let flow below content to start the installation pyfamsa

To install pyfamsa on Windows(CMD):

py -m pip install pyfamsa

To install pyfamsa on Unix/macOs:

pip install pyfamsa


Step 3: If you want to install a specific pyfamsa version, add ==<pyfamsa version> to the end command line

Example:

pip install pyfamsa==0.1.0


Please see the version list below table:

VersionReleased dateCommand
pyfamsa 0.1.12022-08-06T13:36:53Windows:

py -m pip install pyfamsa==0.1.1

Unix/macOs:

pip install pyfamsa==0.1.1

pyfamsa 0.1.02022-08-05T01:09:10Windows:

py -m pip install pyfamsa==0.1.0

Unix/macOs:

pip install pyfamsa==0.1.0


Step 4: Otherwise, you can install pyfamsa from local archives:

Download the distribution file from pyfamsa-0.1.1.tar.gz or the specific pyfamsa version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pyfamsa_downloaded_file>

On Unix/macOs:

pip install <path_to_pyfamsa_downloaded_file>


List distribution:


Project link:

- Homepage
- Bug Tracker
- Builds
- Changelog
- Coverage
- Documentation
- PyPI