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How to install pyfaidx via python pip

pyfaidx - pyfaidx: efficient pythonic random access to fasta subsequences, it belongs to Classifiers:

- Development Status :: 5 - Production/Stable
- Environment :: Console
- Intended Audience :: Science/Research
- License :: OSI Approved
- License :: OSI Approved :: BSD License
- Natural Language :: English
- Operating System :: Unix
- Programming Language :: Python :: 2
- Programming Language :: Python :: 2.7
- Programming Language :: Python :: 3.4
- Programming Language :: Python :: 3.5
- Programming Language :: Python :: 3.6
- Programming Language :: Python :: 3.7
- Programming Language :: Python :: Implementation
- Programming Language :: Python :: Implementation :: PyPy
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install pyfaidx to support your project or you get trouble as ModuleNotFoundError: No module named "pyfaidx" or ImportError: cannot import name "pyfaidx" in your project, let follow this tutorial to install pyfaidx

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel

Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_pyfaidx_env

- Active the virtual environment

test_pyfaidx_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_pyfaidx_env

- Active the virtual environment

source test_pyfaidx_env/bin/active

Step 2: OK, now, let flow below content to start the installation pyfaidx

To install pyfaidx on Windows(CMD):

py -m pip install pyfaidx

To install pyfaidx on Unix/macOs:

pip install pyfaidx

Step 3: If you want to install a specific pyfaidx version, add ==<pyfaidx version> to the end command line

Example: 

pip install pyfaidx==0.1.0

Please see the version list below table:

VersionReleased dateCommand
pyfaidx 0.7.12022-07-26T16:28:38Windows:

py -m pip install pyfaidx==0.7.1

Unix/macOs:

pip install pyfaidx==0.7.1

pyfaidx 0.7.02022-06-02T02:46:50Windows:

py -m pip install pyfaidx==0.7.0

Unix/macOs:

pip install pyfaidx==0.7.0

pyfaidx 0.6.42022-01-31T19:43:53Windows:

py -m pip install pyfaidx==0.6.4

Unix/macOs:

pip install pyfaidx==0.6.4

pyfaidx 0.6.3.12021-10-28T19:45:41Windows:

py -m pip install pyfaidx==0.6.3.1

Unix/macOs:

pip install pyfaidx==0.6.3.1

pyfaidx 0.6.32021-10-28T19:40:43Windows:

py -m pip install pyfaidx==0.6.3

Unix/macOs:

pip install pyfaidx==0.6.3

pyfaidx 0.6.22021-08-30T14:50:26Windows:

py -m pip install pyfaidx==0.6.2

Unix/macOs:

pip install pyfaidx==0.6.2

pyfaidx 0.6.12021-07-14T13:43:32Windows:

py -m pip install pyfaidx==0.6.1

Unix/macOs:

pip install pyfaidx==0.6.1

pyfaidx 0.6.02021-06-29T23:05:50Windows:

py -m pip install pyfaidx==0.6.0

Unix/macOs:

pip install pyfaidx==0.6.0

pyfaidx 0.5.9.52021-02-28T13:44:47Windows:

py -m pip install pyfaidx==0.5.9.5

Unix/macOs:

pip install pyfaidx==0.5.9.5

pyfaidx 0.5.9.22020-12-09T00:56:52Windows:

py -m pip install pyfaidx==0.5.9.2

Unix/macOs:

pip install pyfaidx==0.5.9.2

pyfaidx 0.5.9.12020-07-29T14:44:20Windows:

py -m pip install pyfaidx==0.5.9.1

Unix/macOs:

pip install pyfaidx==0.5.9.1

pyfaidx 0.5.92020-06-22T21:20:00Windows:

py -m pip install pyfaidx==0.5.9

Unix/macOs:

pip install pyfaidx==0.5.9

pyfaidx 0.5.82020-01-16T15:58:19Windows:

py -m pip install pyfaidx==0.5.8

Unix/macOs:

pip install pyfaidx==0.5.8

pyfaidx 0.5.72019-12-10T15:33:27Windows:

py -m pip install pyfaidx==0.5.7

Unix/macOs:

pip install pyfaidx==0.5.7

pyfaidx 0.5.62019-11-22T16:17:45Windows:

py -m pip install pyfaidx==0.5.6

Unix/macOs:

pip install pyfaidx==0.5.6

pyfaidx 0.5.5.22018-10-27T02:35:13Windows:

py -m pip install pyfaidx==0.5.5.2

Unix/macOs:

pip install pyfaidx==0.5.5.2

pyfaidx 0.5.5.12018-10-14T20:14:47Windows:

py -m pip install pyfaidx==0.5.5.1

Unix/macOs:

pip install pyfaidx==0.5.5.1

pyfaidx 0.5.52018-09-19T15:25:37Windows:

py -m pip install pyfaidx==0.5.5

Unix/macOs:

pip install pyfaidx==0.5.5

pyfaidx 0.5.4.22018-08-04T01:34:45Windows:

py -m pip install pyfaidx==0.5.4.2

Unix/macOs:

pip install pyfaidx==0.5.4.2

pyfaidx 0.5.4.12018-06-20T02:00:32Windows:

py -m pip install pyfaidx==0.5.4.1

Unix/macOs:

pip install pyfaidx==0.5.4.1

pyfaidx 0.5.42018-05-12T15:48:29Windows:

py -m pip install pyfaidx==0.5.4

Unix/macOs:

pip install pyfaidx==0.5.4

pyfaidx 0.5.3.12018-02-09T01:03:37Windows:

py -m pip install pyfaidx==0.5.3.1

Unix/macOs:

pip install pyfaidx==0.5.3.1

pyfaidx 0.5.32018-02-05T21:56:24Windows:

py -m pip install pyfaidx==0.5.3

Unix/macOs:

pip install pyfaidx==0.5.3

pyfaidx 0.5.22018-01-25T02:28:51Windows:

py -m pip install pyfaidx==0.5.2

Unix/macOs:

pip install pyfaidx==0.5.2

pyfaidx 0.5.12017-10-26T17:31:50Windows:

py -m pip install pyfaidx==0.5.1

Unix/macOs:

pip install pyfaidx==0.5.1

pyfaidx 0.5.0.12017-09-11T15:29:45Windows:

py -m pip install pyfaidx==0.5.0.1

Unix/macOs:

pip install pyfaidx==0.5.0.1

pyfaidx 0.5.02017-07-25T18:59:36Windows:

py -m pip install pyfaidx==0.5.0

Unix/macOs:

pip install pyfaidx==0.5.0

pyfaidx 0.4.9.22017-06-15T17:41:14Windows:

py -m pip install pyfaidx==0.4.9.2

Unix/macOs:

pip install pyfaidx==0.4.9.2

pyfaidx 0.4.9.12017-06-15T16:02:36Windows:

py -m pip install pyfaidx==0.4.9.1

Unix/macOs:

pip install pyfaidx==0.4.9.1

pyfaidx 0.4.92017-06-14T02:16:44Windows:

py -m pip install pyfaidx==0.4.9

Unix/macOs:

pip install pyfaidx==0.4.9

pyfaidx 0.4.8.42017-04-18T18:04:33Windows:

py -m pip install pyfaidx==0.4.8.4

Unix/macOs:

pip install pyfaidx==0.4.8.4

pyfaidx 0.4.8.32017-03-26T15:28:44Windows:

py -m pip install pyfaidx==0.4.8.3

Unix/macOs:

pip install pyfaidx==0.4.8.3

pyfaidx 0.4.8.22017-03-02T02:30:16Windows:

py -m pip install pyfaidx==0.4.8.2

Unix/macOs:

pip install pyfaidx==0.4.8.2

pyfaidx 0.4.8.12016-10-20T01:11:18Windows:

py -m pip install pyfaidx==0.4.8.1

Unix/macOs:

pip install pyfaidx==0.4.8.1

pyfaidx 0.4.82016-10-16T21:03:14Windows:

py -m pip install pyfaidx==0.4.8

Unix/macOs:

pip install pyfaidx==0.4.8

pyfaidx 0.4.7.12015-12-31T18:11:02Windows:

py -m pip install pyfaidx==0.4.7.1

Unix/macOs:

pip install pyfaidx==0.4.7.1

pyfaidx 0.4.72015-12-10T19:14:57Windows:

py -m pip install pyfaidx==0.4.7

Unix/macOs:

pip install pyfaidx==0.4.7

pyfaidx 0.4.62015-12-08T21:29:09Windows:

py -m pip install pyfaidx==0.4.6

Unix/macOs:

pip install pyfaidx==0.4.6

pyfaidx 0.4.5.22015-11-17T22:07:41Windows:

py -m pip install pyfaidx==0.4.5.2

Unix/macOs:

pip install pyfaidx==0.4.5.2

pyfaidx 0.4.5.12015-11-17T01:54:57Windows:

py -m pip install pyfaidx==0.4.5.1

Unix/macOs:

pip install pyfaidx==0.4.5.1

pyfaidx 0.4.52015-11-16T19:56:23Windows:

py -m pip install pyfaidx==0.4.5

Unix/macOs:

pip install pyfaidx==0.4.5

pyfaidx 0.4.42015-10-26T13:47:23Windows:

py -m pip install pyfaidx==0.4.4

Unix/macOs:

pip install pyfaidx==0.4.4

pyfaidx 0.4.3.12015-10-24T11:41:23Windows:

py -m pip install pyfaidx==0.4.3.1

Unix/macOs:

pip install pyfaidx==0.4.3.1

pyfaidx 0.4.32015-10-22T17:31:12Windows:

py -m pip install pyfaidx==0.4.3

Unix/macOs:

pip install pyfaidx==0.4.3

pyfaidx 0.4.22015-08-03T14:32:53Windows:

py -m pip install pyfaidx==0.4.2

Unix/macOs:

pip install pyfaidx==0.4.2

pyfaidx 0.4.1.12015-05-12T14:46:05Windows:

py -m pip install pyfaidx==0.4.1.1

Unix/macOs:

pip install pyfaidx==0.4.1.1

pyfaidx 0.4.12015-05-08T16:27:06Windows:

py -m pip install pyfaidx==0.4.1

Unix/macOs:

pip install pyfaidx==0.4.1

pyfaidx 0.4.0.12015-05-12T14:13:00Windows:

py -m pip install pyfaidx==0.4.0.1

Unix/macOs:

pip install pyfaidx==0.4.0.1

pyfaidx 0.4.02015-04-30T20:34:37Windows:

py -m pip install pyfaidx==0.4.0

Unix/macOs:

pip install pyfaidx==0.4.0

pyfaidx 0.3.9.12015-05-12T14:12:21Windows:

py -m pip install pyfaidx==0.3.9.1

Unix/macOs:

pip install pyfaidx==0.3.9.1

pyfaidx 0.3.92015-04-05T01:59:53Windows:

py -m pip install pyfaidx==0.3.9

Unix/macOs:

pip install pyfaidx==0.3.9

pyfaidx 0.3.8.12015-05-12T14:11:02Windows:

py -m pip install pyfaidx==0.3.8.1

Unix/macOs:

pip install pyfaidx==0.3.8.1

pyfaidx 0.3.82015-04-02T14:20:44Windows:

py -m pip install pyfaidx==0.3.8

Unix/macOs:

pip install pyfaidx==0.3.8

pyfaidx 0.3.7.12015-05-12T14:11:31Windows:

py -m pip install pyfaidx==0.3.7.1

Unix/macOs:

pip install pyfaidx==0.3.7.1

pyfaidx 0.3.72015-03-03T19:47:52Windows:

py -m pip install pyfaidx==0.3.7

Unix/macOs:

pip install pyfaidx==0.3.7

pyfaidx 0.3.6.12015-05-12T14:07:14Windows:

py -m pip install pyfaidx==0.3.6.1

Unix/macOs:

pip install pyfaidx==0.3.6.1

pyfaidx 0.3.62015-03-02T22:29:04Windows:

py -m pip install pyfaidx==0.3.6

Unix/macOs:

pip install pyfaidx==0.3.6

pyfaidx 0.3.52015-02-13T19:51:24Windows:

py -m pip install pyfaidx==0.3.5

Unix/macOs:

pip install pyfaidx==0.3.5

pyfaidx 0.3.42015-01-13T01:19:09Windows:

py -m pip install pyfaidx==0.3.4

Unix/macOs:

pip install pyfaidx==0.3.4

pyfaidx 0.3.32015-01-07T21:10:07Windows:

py -m pip install pyfaidx==0.3.3

Unix/macOs:

pip install pyfaidx==0.3.3

pyfaidx 0.3.22014-12-26T20:22:46Windows:

py -m pip install pyfaidx==0.3.2

Unix/macOs:

pip install pyfaidx==0.3.2

pyfaidx 0.3.12014-12-15T00:21:40Windows:

py -m pip install pyfaidx==0.3.1

Unix/macOs:

pip install pyfaidx==0.3.1

pyfaidx 0.3.02014-11-20T22:54:52Windows:

py -m pip install pyfaidx==0.3.0

Unix/macOs:

pip install pyfaidx==0.3.0

pyfaidx 0.2.92014-11-08T13:46:07Windows:

py -m pip install pyfaidx==0.2.9

Unix/macOs:

pip install pyfaidx==0.2.9

pyfaidx 0.2.82014-10-28T19:36:10Windows:

py -m pip install pyfaidx==0.2.8

Unix/macOs:

pip install pyfaidx==0.2.8

pyfaidx 0.2.72014-09-09T20:59:26Windows:

py -m pip install pyfaidx==0.2.7

Unix/macOs:

pip install pyfaidx==0.2.7

pyfaidx 0.2.62014-09-04T17:08:07Windows:

py -m pip install pyfaidx==0.2.6

Unix/macOs:

pip install pyfaidx==0.2.6

pyfaidx 0.2.52014-08-27T19:18:31Windows:

py -m pip install pyfaidx==0.2.5

Unix/macOs:

pip install pyfaidx==0.2.5

pyfaidx 0.2.42014-08-06T23:28:23Windows:

py -m pip install pyfaidx==0.2.4

Unix/macOs:

pip install pyfaidx==0.2.4

pyfaidx 0.2.32014-07-29T21:37:17Windows:

py -m pip install pyfaidx==0.2.3

Unix/macOs:

pip install pyfaidx==0.2.3

pyfaidx 0.2.12014-07-03T13:57:04Windows:

py -m pip install pyfaidx==0.2.1

Unix/macOs:

pip install pyfaidx==0.2.1

pyfaidx 0.2.02014-07-01T18:00:36Windows:

py -m pip install pyfaidx==0.2.0

Unix/macOs:

pip install pyfaidx==0.2.0

pyfaidx 0.1.92014-06-23T23:45:24Windows:

py -m pip install pyfaidx==0.1.9

Unix/macOs:

pip install pyfaidx==0.1.9

pyfaidx 0.1.82014-06-16T18:15:37Windows:

py -m pip install pyfaidx==0.1.8

Unix/macOs:

pip install pyfaidx==0.1.8

pyfaidx 0.1.72014-06-10T18:24:17Windows:

py -m pip install pyfaidx==0.1.7

Unix/macOs:

pip install pyfaidx==0.1.7

pyfaidx 0.1.62014-04-21T23:58:12Windows:

py -m pip install pyfaidx==0.1.6

Unix/macOs:

pip install pyfaidx==0.1.6

pyfaidx 0.1.52014-04-16T16:09:01Windows:

py -m pip install pyfaidx==0.1.5

Unix/macOs:

pip install pyfaidx==0.1.5

pyfaidx 0.1.42014-04-15T14:51:51Windows:

py -m pip install pyfaidx==0.1.4

Unix/macOs:

pip install pyfaidx==0.1.4

pyfaidx 0.1.32014-03-03T14:59:06Windows:

py -m pip install pyfaidx==0.1.3

Unix/macOs:

pip install pyfaidx==0.1.3

pyfaidx 0.1.22014-02-25T18:45:18Windows:

py -m pip install pyfaidx==0.1.2

Unix/macOs:

pip install pyfaidx==0.1.2

pyfaidx 0.1.12014-02-17T18:14:44Windows:

py -m pip install pyfaidx==0.1.1

Unix/macOs:

pip install pyfaidx==0.1.1

pyfaidx 0.1.02014-02-03T18:03:59Windows:

py -m pip install pyfaidx==0.1.0

Unix/macOs:

pip install pyfaidx==0.1.0

Step 4: Otherwise, you can install pyfaidx from local archives:

Download the distribution file from pyfaidx-0.7.1.tar.gz or the specific pyfaidx version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pyfaidx_downloaded_file>

On Unix/macOs:

pip install <path_to_pyfaidx_downloaded_file>

List distribution:

Project link:

- Homepage

 

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