How to install variant-spark via python pip

- Development Status :: 2 - Pre-Alpha
- Intended Audience :: Science/Research
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install variant-spark to support your project or you get trouble as ModuleNotFoundError: No module named "variant-spark" or ImportError: cannot import name "variant-spark" in your project, let follow this tutorial to install variant-spark

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel

py -m pip install --user virtualenv

py -m venv test_variant-spark_env

test_variant-spark_env\Scripts\active

pip3 install virtualenv

python3 -m venv test_variant-spark_env

source test_variant-spark_env/bin/active

Step 2: OK, now, let flow below content to start the installation variant-spark

To install variant-spark on Windows(CMD):

py -m pip install variant-spark

To install variant-spark on Unix/macOs:

pip install variant-spark

Step 3: If you want to install a specific variant-spark version, add ==<variant-spark version> to the end command line

Example:

pip install variant-spark==0.2.0a0.dev102                                                        pre-release

Please see the version list below table:

py -m pip install variant-spark==0.5.0

pip install variant-spark==0.5.0

py -m pip install variant-spark==0.4.0

pip install variant-spark==0.4.0

py -m pip install variant-spark==0.3.0

pip install variant-spark==0.3.0

py -m pip install variant-spark==0.2.0

pip install variant-spark==0.2.0

Step 4: Otherwise, you can install variant-spark from local archives:

Download the distribution file from variant-spark-0.5.0.tar.gz or the specific variant-spark version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_variant-spark_downloaded_file>

On Unix/macOs:

pip install <path_to_variant-spark_downloaded_file>

List distribution:

Project link:

- Homepage
- Bug Tracker
- Documentation
- Source Code