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How to install ucscgenome via python pip




ucscgenome - Simple access to the reference genomes at UCSC, it belongs to Classifiers:

- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install ucscgenome to support your project or you get trouble as ModuleNotFoundError: No module named "ucscgenome" or ImportError: cannot import name "ucscgenome" in your project, let follow this tutorial to install ucscgenome



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_ucscgenome_env

- Active the virtual environment

test_ucscgenome_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_ucscgenome_env

- Active the virtual environment

source test_ucscgenome_env/bin/active


Step 2: OK, now, let flow below content to start the installation ucscgenome

To install ucscgenome on Windows(CMD):

py -m pip install ucscgenome

To install ucscgenome on Unix/macOs:

pip install ucscgenome


Step 3: If you want to install a specific ucscgenome version, add ==<ucscgenome version> to the end command line

Example:

pip install ucscgenome==0.1


Please see the version list below table:

VersionReleased dateCommand
ucscgenome 0.12013-06-12T12:09:52Windows:

py -m pip install ucscgenome==0.1

Unix/macOs:

pip install ucscgenome==0.1


Step 4: Otherwise, you can install ucscgenome from local archives:

Download the distribution file from ucscgenome-0.1.zip or the specific ucscgenome version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_ucscgenome_downloaded_file>

On Unix/macOs:

pip install <path_to_ucscgenome_downloaded_file>


List distribution:


Project link:

- Homepage