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How to install trout via python pip




trout - trout is a bioinformatics software package that uses suffix trees to compute the distances between genomes., it belongs to Classifiers:

- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install trout to support your project or you get trouble as ModuleNotFoundError: No module named "trout" or ImportError: cannot import name "trout" in your project, let follow this tutorial to install trout



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_trout_env

- Active the virtual environment

test_trout_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_trout_env

- Active the virtual environment

source test_trout_env/bin/active


Step 2: OK, now, let flow below content to start the installation trout

To install trout on Windows(CMD):

py -m pip install trout

To install trout on Unix/macOs:

pip install trout


Step 3: If you want to install a specific trout version, add ==<trout version> to the end command line

Example:

pip install trout==0.9.0


Please see the version list below table:

VersionReleased dateCommand
trout 0.9.32017-08-10T18:48:33Windows:

py -m pip install trout==0.9.3

Unix/macOs:

pip install trout==0.9.3

trout 0.9.22017-05-25T15:19:53Windows:

py -m pip install trout==0.9.2

Unix/macOs:

pip install trout==0.9.2

trout 0.9.12017-05-25T15:14:00Windows:

py -m pip install trout==0.9.1

Unix/macOs:

pip install trout==0.9.1

trout 0.9.02017-05-25T14:55:38Windows:

py -m pip install trout==0.9.0

Unix/macOs:

pip install trout==0.9.0


Step 4: Otherwise, you can install trout from local archives:

Download the distribution file from trout-0.9.3.tar.gz or the specific trout version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_trout_downloaded_file>

On Unix/macOs:

pip install <path_to_trout_downloaded_file>


List distribution:


Project link:

- Homepage