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How to install surpyvor via python pip




surpyvor - Manipulate vcf files of structural variants using SURVIVOR, it belongs to Classifiers:

- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install surpyvor to support your project or you get trouble as ModuleNotFoundError: No module named "surpyvor" or ImportError: cannot import name "surpyvor" in your project, let follow this tutorial to install surpyvor



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_surpyvor_env

- Active the virtual environment

test_surpyvor_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_surpyvor_env

- Active the virtual environment

source test_surpyvor_env/bin/active


Step 2: OK, now, let flow below content to start the installation surpyvor

To install surpyvor on Windows(CMD):

py -m pip install surpyvor

To install surpyvor on Unix/macOs:

pip install surpyvor


Step 3: If you want to install a specific surpyvor version, add ==<surpyvor version> to the end command line

Example:

pip install surpyvor==0.4.0


Please see the version list below table:

VersionReleased dateCommand
surpyvor 0.12.02022-06-23T10:25:13Windows:

py -m pip install surpyvor==0.12.0

Unix/macOs:

pip install surpyvor==0.12.0

surpyvor 0.11.02021-10-26T07:31:39Windows:

py -m pip install surpyvor==0.11.0

Unix/macOs:

pip install surpyvor==0.11.0

surpyvor 0.10.02021-08-31T08:18:23Windows:

py -m pip install surpyvor==0.10.0

Unix/macOs:

pip install surpyvor==0.10.0

surpyvor 0.8.12020-05-20T20:31:42Windows:

py -m pip install surpyvor==0.8.1

Unix/macOs:

pip install surpyvor==0.8.1

surpyvor 0.6.02019-10-29T07:04:49Windows:

py -m pip install surpyvor==0.6.0

Unix/macOs:

pip install surpyvor==0.6.0

surpyvor 0.5.02019-07-01T14:02:26Windows:

py -m pip install surpyvor==0.5.0

Unix/macOs:

pip install surpyvor==0.5.0

surpyvor 0.4.02019-04-05T11:35:43Windows:

py -m pip install surpyvor==0.4.0

Unix/macOs:

pip install surpyvor==0.4.0


Step 4: Otherwise, you can install surpyvor from local archives:

Download the distribution file from surpyvor-0.12.0.tar.gz or the specific surpyvor version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_surpyvor_downloaded_file>

On Unix/macOs:

pip install <path_to_surpyvor_downloaded_file>


List distribution:


Project link:

- Homepage