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How to install snakewrap via python pip




snakewrap - Snakemake Wrapper for NGS Pipelines, it belongs to Classifiers:

- Intended Audience :: Science/Research
- License :: OSI Approved :: GNU General Public License v3 (GPLv3)
- Programming Language :: Python :: 3.6
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install snakewrap to support your project or you get trouble as ModuleNotFoundError: No module named "snakewrap" or ImportError: cannot import name "snakewrap" in your project, let follow this tutorial to install snakewrap



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_snakewrap_env

- Active the virtual environment

test_snakewrap_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_snakewrap_env

- Active the virtual environment

source test_snakewrap_env/bin/active


Step 2: OK, now, let flow below content to start the installation snakewrap

To install snakewrap on Windows(CMD):

py -m pip install snakewrap

To install snakewrap on Unix/macOs:

pip install snakewrap


Step 3: If you want to install a specific snakewrap version, add ==<snakewrap version> to the end command line

Example:

pip install snakewrap==0.0.1


Please see the version list below table:

VersionReleased dateCommand
snakewrap 0.0.32021-04-13T22:39:11Windows:

py -m pip install snakewrap==0.0.3

Unix/macOs:

pip install snakewrap==0.0.3

snakewrap 0.0.22021-04-08T16:16:52Windows:

py -m pip install snakewrap==0.0.2

Unix/macOs:

pip install snakewrap==0.0.2

snakewrap 0.0.12021-04-08T00:35:45Windows:

py -m pip install snakewrap==0.0.1

Unix/macOs:

pip install snakewrap==0.0.1


Step 4: Otherwise, you can install snakewrap from local archives:

Download the distribution file from snakewrap-0.0.3.tar.gz or the specific snakewrap version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_snakewrap_downloaded_file>

On Unix/macOs:

pip install <path_to_snakewrap_downloaded_file>


List distribution:


Project link: