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How to install sixgill via python pip




sixgill - six-frame genome-inferred libraries for LC-MS/MS, it belongs to Classifiers:

- Development Status :: 4 - Beta
- Intended Audience :: Science/Research
- License :: OSI Approved :: Apache Software License
- Programming Language :: Python :: 2
- Programming Language :: Python :: 2.7
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install sixgill to support your project or you get trouble as ModuleNotFoundError: No module named "sixgill" or ImportError: cannot import name "sixgill" in your project, let follow this tutorial to install sixgill



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_sixgill_env

- Active the virtual environment

test_sixgill_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_sixgill_env

- Active the virtual environment

source test_sixgill_env/bin/active


Step 2: OK, now, let flow below content to start the installation sixgill

To install sixgill on Windows(CMD):

py -m pip install sixgill

To install sixgill on Unix/macOs:

pip install sixgill


Step 3: If you want to install a specific sixgill version, add ==<sixgill version> to the end command line

Example:

pip install sixgill==0.1.0


Please see the version list below table:

VersionReleased dateCommand
sixgill 0.2.42016-10-11T21:51:12Windows:

py -m pip install sixgill==0.2.4

Unix/macOs:

pip install sixgill==0.2.4

sixgill 0.2.32016-10-10T21:59:39Windows:

py -m pip install sixgill==0.2.3

Unix/macOs:

pip install sixgill==0.2.3

sixgill 0.2.22016-10-10T19:40:46Windows:

py -m pip install sixgill==0.2.2

Unix/macOs:

pip install sixgill==0.2.2

sixgill 0.2.12016-06-10T21:29:49Windows:

py -m pip install sixgill==0.2.1

Unix/macOs:

pip install sixgill==0.2.1

sixgill 0.2.02016-06-10T21:08:20Windows:

py -m pip install sixgill==0.2.0

Unix/macOs:

pip install sixgill==0.2.0

sixgill 0.1.32016-03-16T19:23:45Windows:

py -m pip install sixgill==0.1.3

Unix/macOs:

pip install sixgill==0.1.3

sixgill 0.1.22016-02-18T21:21:56Windows:

py -m pip install sixgill==0.1.2

Unix/macOs:

pip install sixgill==0.1.2

sixgill 0.1.02016-02-18T21:21:27Windows:

py -m pip install sixgill==0.1.0

Unix/macOs:

pip install sixgill==0.1.0


Step 4: Otherwise, you can install sixgill from local archives:

Download the distribution file from sixgill-0.2.4.tar.gz or the specific sixgill version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_sixgill_downloaded_file>

On Unix/macOs:

pip install <path_to_sixgill_downloaded_file>


List distribution:


Project link: