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How to install pysradb via python pip

pysradb - A Python package for interacting with SRAdb and downloading datasets from SRA/ENA/GEO, it belongs to Classifiers:

- Intended Audience :: Healthcare Industry
- Intended Audience :: Science/Research
- License :: OSI Approved :: BSD License
- Natural Language :: English
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install pysradb to support your project or you get trouble as ModuleNotFoundError: No module named "pysradb" or ImportError: cannot import name "pysradb" in your project, let follow this tutorial to install pysradb

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel

Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_pysradb_env

- Active the virtual environment

test_pysradb_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_pysradb_env

- Active the virtual environment

source test_pysradb_env/bin/active

Step 2: OK, now, let flow below content to start the installation pysradb

To install pysradb on Windows(CMD):

py -m pip install pysradb

To install pysradb on Unix/macOs:

pip install pysradb

Step 3: If you want to install a specific pysradb version, add ==<pysradb version> to the end command line

Example: 

pip install pysradb==0.1.0

Please see the version list below table:

VersionReleased dateCommand
pysradb 1.4.22022-07-17T13:52:18Windows:

py -m pip install pysradb==1.4.2

Unix/macOs:

pip install pysradb==1.4.2

pysradb 1.4.12022-06-05T03:56:04Windows:

py -m pip install pysradb==1.4.1

Unix/macOs:

pip install pysradb==1.4.1

pysradb 1.4.02022-06-05T03:31:32Windows:

py -m pip install pysradb==1.4.0

Unix/macOs:

pip install pysradb==1.4.0

pysradb 1.3.02022-02-18T21:58:30Windows:

py -m pip install pysradb==1.3.0

Unix/macOs:

pip install pysradb==1.3.0

pysradb 1.2.02022-01-10T16:35:32Windows:

py -m pip install pysradb==1.2.0

Unix/macOs:

pip install pysradb==1.2.0

pysradb 1.1.02021-12-12T15:11:40Windows:

py -m pip install pysradb==1.1.0

Unix/macOs:

pip install pysradb==1.1.0

pysradb 1.0.12021-01-10T16:08:56Windows:

py -m pip install pysradb==1.0.1

Unix/macOs:

pip install pysradb==1.0.1

pysradb 1.0.02021-01-09T19:13:18Windows:

py -m pip install pysradb==1.0.0

Unix/macOs:

pip install pysradb==1.0.0

pysradb 0.11.12020-09-18T22:25:43Windows:

py -m pip install pysradb==0.11.1

Unix/macOs:

pip install pysradb==0.11.1

pysradb 0.11.02020-09-05T04:05:49Windows:

py -m pip install pysradb==0.11.0

Unix/macOs:

pip install pysradb==0.11.0

pysradb 0.10.42020-04-16T09:11:48Windows:

py -m pip install pysradb==0.10.4

Unix/macOs:

pip install pysradb==0.10.4

pysradb 0.10.32020-03-26T18:59:26Windows:

py -m pip install pysradb==0.10.3

Unix/macOs:

pip install pysradb==0.10.3

pysradb 0.10.22020-02-05T18:31:52Windows:

py -m pip install pysradb==0.10.2

Unix/macOs:

pip install pysradb==0.10.2

pysradb 0.10.12020-02-04T06:17:48Windows:

py -m pip install pysradb==0.10.1

Unix/macOs:

pip install pysradb==0.10.1

pysradb 0.10.02020-02-01T23:32:49Windows:

py -m pip install pysradb==0.10.0

Unix/macOs:

pip install pysradb==0.10.0

pysradb 0.9.92020-01-22T02:49:52Windows:

py -m pip install pysradb==0.9.9

Unix/macOs:

pip install pysradb==0.9.9

pysradb 0.9.82020-01-22T02:45:03Windows:

py -m pip install pysradb==0.9.8

Unix/macOs:

pip install pysradb==0.9.8

pysradb 0.9.72020-01-20T19:45:52Windows:

py -m pip install pysradb==0.9.7

Unix/macOs:

pip install pysradb==0.9.7

pysradb 0.9.62019-07-21T07:47:08Windows:

py -m pip install pysradb==0.9.6

Unix/macOs:

pip install pysradb==0.9.6

pysradb 0.9.52019-07-20T11:14:24Windows:

py -m pip install pysradb==0.9.5

Unix/macOs:

pip install pysradb==0.9.5

pysradb 0.9.02019-02-28T02:31:41Windows:

py -m pip install pysradb==0.9.0

Unix/macOs:

pip install pysradb==0.9.0

pysradb 0.8.02019-02-26T19:22:50Windows:

py -m pip install pysradb==0.8.0

Unix/macOs:

pip install pysradb==0.8.0

pysradb 0.7.12019-02-18T23:44:02Windows:

py -m pip install pysradb==0.7.1

Unix/macOs:

pip install pysradb==0.7.1

pysradb 0.7.02019-02-10T02:40:54Windows:

py -m pip install pysradb==0.7.0

Unix/macOs:

pip install pysradb==0.7.0

pysradb 0.6.02018-12-26T00:02:08Windows:

py -m pip install pysradb==0.6.0

Unix/macOs:

pip install pysradb==0.6.0

pysradb 0.5.02018-12-25T23:59:05Windows:

py -m pip install pysradb==0.5.0

Unix/macOs:

pip install pysradb==0.5.0

pysradb 0.4.22018-12-16T09:16:46Windows:

py -m pip install pysradb==0.4.2

Unix/macOs:

pip install pysradb==0.4.2

pysradb 0.4.12018-12-16T00:53:41Windows:

py -m pip install pysradb==0.4.1

Unix/macOs:

pip install pysradb==0.4.1

pysradb 0.4.02018-12-13T01:34:23Windows:

py -m pip install pysradb==0.4.0

Unix/macOs:

pip install pysradb==0.4.0

pysradb 0.3.02018-12-06T05:01:53Windows:

py -m pip install pysradb==0.3.0

Unix/macOs:

pip install pysradb==0.3.0

pysradb 0.2.22018-12-04T05:15:37Windows:

py -m pip install pysradb==0.2.2

Unix/macOs:

pip install pysradb==0.2.2

pysradb 0.2.02018-12-03T21:35:25Windows:

py -m pip install pysradb==0.2.0

Unix/macOs:

pip install pysradb==0.2.0

pysradb 0.1.02018-12-02T00:41:45Windows:

py -m pip install pysradb==0.1.0

Unix/macOs:

pip install pysradb==0.1.0

Step 4: Otherwise, you can install pysradb from local archives:

Download the distribution file from pysradb-1.4.2.tar.gz or the specific pysradb version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pysradb_downloaded_file>

On Unix/macOs:

pip install <path_to_pysradb_downloaded_file>

List distribution:

Project link:

- Homepage

 

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