How to install pyopenms via python pip

- Topic :: Scientific/Engineering :: Bio-Informatics
- Topic :: Scientific/Engineering :: Chemistry

When you know about this project and you want to new install pyopenms to support your project or you get trouble as ModuleNotFoundError: No module named "pyopenms" or ImportError: cannot import name "pyopenms" in your project, let follow this tutorial to install pyopenms

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel

py -m pip install --user virtualenv

py -m venv test_pyopenms_env

test_pyopenms_env\Scripts\active

pip3 install virtualenv

python3 -m venv test_pyopenms_env

source test_pyopenms_env/bin/active

Step 2: OK, now, let flow below content to start the installation pyopenms

To install pyopenms on Windows(CMD):

py -m pip install pyopenms

To install pyopenms on Unix/macOs:

pip install pyopenms

Step 3: If you want to install a specific pyopenms version, add ==<pyopenms version> to the end command line

Example:

pip install pyopenms==1.10.1

Please see the version list below table:

py -m pip install pyopenms==2.7.0

pip install pyopenms==2.7.0

py -m pip install pyopenms==2.6.0

pip install pyopenms==2.6.0

py -m pip install pyopenms==2.5.0

pip install pyopenms==2.5.0

py -m pip install pyopenms==2.4.0

pip install pyopenms==2.4.0

py -m pip install pyopenms==2.3.0.4

pip install pyopenms==2.3.0.4

py -m pip install pyopenms==2.3.0.3

pip install pyopenms==2.3.0.3

py -m pip install pyopenms==2.3.0.2

pip install pyopenms==2.3.0.2

py -m pip install pyopenms==2.3.0.1

pip install pyopenms==2.3.0.1

py -m pip install pyopenms==2.3.0

pip install pyopenms==2.3.0

py -m pip install pyopenms==2.2.0

pip install pyopenms==2.2.0

py -m pip install pyopenms==2.1.0

pip install pyopenms==2.1.0

py -m pip install pyopenms==2.0.1

pip install pyopenms==2.0.1

py -m pip install pyopenms==2.0.0

pip install pyopenms==2.0.0

py -m pip install pyopenms==1.11

pip install pyopenms==1.11

py -m pip install pyopenms==1.10.1

pip install pyopenms==1.10.1

Step 4: Otherwise, you can install pyopenms from local archives:

Download the distribution file from pyopenms-2.7.0-cp39-cp39-win_amd64.whl or the specific pyopenms version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pyopenms_downloaded_file>

On Unix/macOs:

pip install <path_to_pyopenms_downloaded_file>

List distribution:

Project link:

- Homepage