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How to install pathway-assessor via python pip




pathway-assessor - For assessing the overrepresentation and underrepresentation of pathway genes in a given expression table, it belongs to Classifiers:

- License :: OSI Approved
- License :: OSI Approved :: MIT License
- Operating System :: OS Independent
- Programming Language :: Python
- Programming Language :: Python :: 3

When you know about this project and you want to new install pathway-assessor to support your project or you get trouble as ModuleNotFoundError: No module named "pathway-assessor" or ImportError: cannot import name "pathway-assessor" in your project, let follow this tutorial to install pathway-assessor



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_pathway-assessor_env

- Active the virtual environment

test_pathway-assessor_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_pathway-assessor_env

- Active the virtual environment

source test_pathway-assessor_env/bin/active


Step 2: OK, now, let flow below content to start the installation pathway-assessor

To install pathway-assessor on Windows(CMD):

py -m pip install pathway-assessor

To install pathway-assessor on Unix/macOs:

pip install pathway-assessor


Step 3: If you want to install a specific pathway-assessor version, add ==<pathway-assessor version> to the end command line

Example:

pip install pathway-assessor==0.0.1


Please see the version list below table:

VersionReleased dateCommand
pathway-assessor 0.0.42019-10-27T20:27:19Windows:

py -m pip install pathway-assessor==0.0.4

Unix/macOs:

pip install pathway-assessor==0.0.4

pathway-assessor 0.0.32019-04-10T18:26:04Windows:

py -m pip install pathway-assessor==0.0.3

Unix/macOs:

pip install pathway-assessor==0.0.3

pathway-assessor 0.0.22019-04-10T18:23:24Windows:

py -m pip install pathway-assessor==0.0.2

Unix/macOs:

pip install pathway-assessor==0.0.2

pathway-assessor 0.0.12019-04-10T18:12:56Windows:

py -m pip install pathway-assessor==0.0.1

Unix/macOs:

pip install pathway-assessor==0.0.1


Step 4: Otherwise, you can install pathway-assessor from local archives:

Download the distribution file from pathway-assessor-0.0.4.tar.gz or the specific pathway-assessor version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pathway-assessor_downloaded_file>

On Unix/macOs:

pip install <path_to_pathway-assessor_downloaded_file>


List distribution:


Project link:

- Homepage