How to install HiCShuffle via python pip

- Programming Language :: Awk
- Programming Language :: Python :: 3.0
- Programming Language :: Python :: 3.2
- Programming Language :: Python :: 3.3
- Programming Language :: Unix Shell
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install HiCShuffle to support your project or you get trouble as ModuleNotFoundError: No module named "HiCShuffle" or ImportError: cannot import name "HiCShuffle" in your project, let follow this tutorial to install HiCShuffle

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel

py -m pip install --user virtualenv

py -m venv test_HiCShuffle_env

test_HiCShuffle_env\Scripts\active

pip3 install virtualenv

python3 -m venv test_HiCShuffle_env

source test_HiCShuffle_env/bin/active

Step 2: OK, now, let flow below content to start the installation HiCShuffle

To install HiCShuffle on Windows(CMD):

py -m pip install HiCShuffle

To install HiCShuffle on Unix/macOs:

pip install HiCShuffle

Step 3: If you want to install a specific HiCShuffle version, add ==<HiCShuffle version> to the end command line

Example:

pip install HiCShuffle==1.0.0

Please see the version list below table:

py -m pip install HiCShuffle==1.1.1

pip install HiCShuffle==1.1.1

py -m pip install HiCShuffle==1.1.0

pip install HiCShuffle==1.1.0

py -m pip install HiCShuffle==1.0.8

pip install HiCShuffle==1.0.8

py -m pip install HiCShuffle==1.0.7

pip install HiCShuffle==1.0.7

py -m pip install HiCShuffle==1.0.6

pip install HiCShuffle==1.0.6

py -m pip install HiCShuffle==1.0.5

pip install HiCShuffle==1.0.5

py -m pip install HiCShuffle==1.0.4

pip install HiCShuffle==1.0.4

py -m pip install HiCShuffle==1.0.3

pip install HiCShuffle==1.0.3

py -m pip install HiCShuffle==1.0.2

pip install HiCShuffle==1.0.2

py -m pip install HiCShuffle==1.0.1

pip install HiCShuffle==1.0.1

py -m pip install HiCShuffle==1.0.0

pip install HiCShuffle==1.0.0

Step 4: Otherwise, you can install HiCShuffle from local archives:

Download the distribution file from HiCShuffle-1.1.1.tar.gz or the specific HiCShuffle version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_HiCShuffle_downloaded_file>

On Unix/macOs:

pip install <path_to_HiCShuffle_downloaded_file>

List distribution:

- HiCShuffle-1.0.0.tar.gz
- HiCShuffle-1.0.1.tar.gz
- HiCShuffle-1.0.2.tar.gz
- HiCShuffle-1.0.3.tar.gz
- HiCShuffle-1.0.4.tar.gz
- HiCShuffle-1.0.5.tar.gz
- HiCShuffle-1.0.6.tar.gz
- HiCShuffle-1.0.7.tar.gz
- HiCShuffle-1.0.8.tar.gz
- HiCShuffle-1.1.0.tar.gz
- HiCShuffle-1.1.1.tar.gz

Project link:

- Homepage
- Download