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How to install dnaloop via python pip




dnaloop - A preprocessing and QC pipeline for ChIA-PET data., it belongs to Classifiers:

- Development Status :: 3 - Alpha
- Environment :: Console
- License :: OSI Approved :: BSD License
- Operating System :: MacOS
- Operating System :: POSIX
- Operating System :: Unix
- Topic :: Software Development :: Libraries :: Python Modules

When you know about this project and you want to new install dnaloop to support your project or you get trouble as ModuleNotFoundError: No module named "dnaloop" or ImportError: cannot import name "dnaloop" in your project, let follow this tutorial to install dnaloop



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_dnaloop_env

- Active the virtual environment

test_dnaloop_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_dnaloop_env

- Active the virtual environment

source test_dnaloop_env/bin/active


Step 2: OK, now, let flow below content to start the installation dnaloop

To install dnaloop on Windows(CMD):

py -m pip install dnaloop

To install dnaloop on Unix/macOs:

pip install dnaloop


Step 3: If you want to install a specific dnaloop version, add ==<dnaloop version> to the end command line

Example:

pip install dnaloop==0.5.1


Please see the version list below table:

VersionReleased dateCommand
dnaloop 0.5.162016-04-27T22:34:19Windows:

py -m pip install dnaloop==0.5.16

Unix/macOs:

pip install dnaloop==0.5.16

dnaloop 0.5.62016-04-01T02:29:38Windows:

py -m pip install dnaloop==0.5.6

Unix/macOs:

pip install dnaloop==0.5.6

dnaloop 0.5.52016-03-30T20:13:33Windows:

py -m pip install dnaloop==0.5.5

Unix/macOs:

pip install dnaloop==0.5.5

dnaloop 0.5.42016-03-30T04:04:05Windows:

py -m pip install dnaloop==0.5.4

Unix/macOs:

pip install dnaloop==0.5.4

dnaloop 0.5.32016-03-28T02:51:53Windows:

py -m pip install dnaloop==0.5.3

Unix/macOs:

pip install dnaloop==0.5.3

dnaloop 0.5.12016-03-24T13:12:38Windows:

py -m pip install dnaloop==0.5.1

Unix/macOs:

pip install dnaloop==0.5.1


Step 4: Otherwise, you can install dnaloop from local archives:

Download the distribution file from dnaloop-0.5.16.tar.gz or the specific dnaloop version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_dnaloop_downloaded_file>

On Unix/macOs:

pip install <path_to_dnaloop_downloaded_file>


List distribution:

- dnaloop-0.5.1.tar.gz
- dnaloop-0.5.3.tar.gz
- dnaloop-0.5.4.tar.gz
- dnaloop-0.5.5.tar.gz
- dnaloop-0.5.6.tar.gz
- dnaloop-0.5.16.tar.gz


Project link:

- Homepage