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How to install culebrONT via python pip




culebrONT - CulebrONT is an open-source, scalable, modular and traceable Snakemake pipeline, able to launch multipleassembly tools in parallel, giving you the possibility of circularise, polish, and correct assemblies, checking quality.CulebrONT can help to choose the best assembly between all possibilities., it belongs to Classifiers:

- Development Status :: 5 - Production/Stable
- Intended Audience :: Developers
- Intended Audience :: End Users/Desktop
- License :: CeCILL-C Free Software License Agreement (CECILL-C)
- License :: Free for non-commercial use
- License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
- Natural Language :: English
- Operating System :: POSIX
- Operating System :: POSIX :: Linux
- Programming Language :: Python :: 3.6
- Programming Language :: Python :: 3.7
- Programming Language :: Python :: 3.8
- Programming Language :: Python :: 3.9
- Programming Language :: R
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics
- Topic :: Software Development :: Assemblers

When you know about this project and you want to new install culebrONT to support your project or you get trouble as ModuleNotFoundError: No module named "culebrONT" or ImportError: cannot import name "culebrONT" in your project, let follow this tutorial to install culebrONT



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_culebrONT_env

- Active the virtual environment

test_culebrONT_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_culebrONT_env

- Active the virtual environment

source test_culebrONT_env/bin/active


Step 2: OK, now, let flow below content to start the installation culebrONT

To install culebrONT on Windows(CMD):

py -m pip install culebrONT

To install culebrONT on Unix/macOs:

pip install culebrONT


Step 3: If you want to install a specific culebrONT version, add ==<culebrONT version> to the end command line

Example:

pip install culebrONT==2.0.0b1                                                        pre-release


Please see the version list below table:

VersionReleased dateCommand
culebrONT 2.1.12022-07-20T14:09:57Windows:

py -m pip install culebrONT==2.1.1

Unix/macOs:

pip install culebrONT==2.1.1

culebrONT 2.1.02022-06-22T12:58:43Windows:

py -m pip install culebrONT==2.1.0

Unix/macOs:

pip install culebrONT==2.1.0

culebrONT 2.0.12022-02-25T15:26:53Windows:

py -m pip install culebrONT==2.0.1

Unix/macOs:

pip install culebrONT==2.0.1

culebrONT 2.0.02022-02-22T13:36:16Windows:

py -m pip install culebrONT==2.0.0

Unix/macOs:

pip install culebrONT==2.0.0


Step 4: Otherwise, you can install culebrONT from local archives:

Download the distribution file from culebrONT-2.1.1.tar.gz or the specific culebrONT version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_culebrONT_downloaded_file>

On Unix/macOs:

pip install <path_to_culebrONT_downloaded_file>


List distribution:

- culebrONT-2.0.0b1-py3-none-any.whl (python version >=3.6)
- culebrONT-2.0.0b1.tar.gz (python version >=3.6)
- culebrONT-2.0.0b2-py3-none-any.whl (python version >=3.6)
- culebrONT-2.0.0b2.tar.gz (python version >=3.6)
- culebrONT-2.0.0-py3-none-any.whl (python version >=3.6)
- culebrONT-2.0.0.tar.gz (python version >=3.6)
- culebrONT-2.0.1-py3-none-any.whl (python version >=3.6)
- culebrONT-2.0.1.tar.gz (python version >=3.6)
- culebrONT-2.1.0-py3-none-any.whl (python version >=3.6)
- culebrONT-2.1.0.tar.gz (python version >=3.6)
- culebrONT-2.1.1-py3-none-any.whl (python version >=3.6)
- culebrONT-2.1.1.tar.gz (python version >=3.6)


Project link:

- Homepage
- Download
- Bug Tracker
- Documentation
- Source Code