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How to install CharGer via python pip




CharGer - Characterization of Germline variants, it belongs to Classifiers:

- License :: OSI Approved :: GNU General Public License v3 (GPLv3)
- Topic :: Scientific/Engineering :: Bio-Informatics
- Topic :: Scientific/Engineering :: Chemistry

When you know about this project and you want to new install CharGer to support your project or you get trouble as ModuleNotFoundError: No module named "CharGer" or ImportError: cannot import name "CharGer" in your project, let follow this tutorial to install CharGer



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_CharGer_env

- Active the virtual environment

test_CharGer_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_CharGer_env

- Active the virtual environment

source test_CharGer_env/bin/active


Step 2: OK, now, let flow below content to start the installation CharGer

To install CharGer on Windows(CMD):

py -m pip install CharGer

To install CharGer on Unix/macOs:

pip install CharGer


Step 3: If you want to install a specific CharGer version, add ==<CharGer version> to the end command line

Example:

pip install CharGer==0.4.0


Please see the version list below table:

VersionReleased dateCommand
CharGer 0.5.22018-01-11T21:14:09Windows:

py -m pip install CharGer==0.5.2

Unix/macOs:

pip install CharGer==0.5.2

CharGer 0.5.12018-01-11T20:44:41Windows:

py -m pip install CharGer==0.5.1

Unix/macOs:

pip install CharGer==0.5.1

CharGer 0.5.02018-01-11T02:56:37Windows:

py -m pip install CharGer==0.5.0

Unix/macOs:

pip install CharGer==0.5.0

CharGer 0.4.02018-01-11T02:56:34Windows:

py -m pip install CharGer==0.4.0

Unix/macOs:

pip install CharGer==0.4.0


Step 4: Otherwise, you can install CharGer from local archives:

Download the distribution file from CharGer-0.5.2.tar.gz or the specific CharGer version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_CharGer_downloaded_file>

On Unix/macOs:

pip install <path_to_CharGer_downloaded_file>


List distribution:

- CharGer-0.4.0.tar.gz
- CharGer-0.5.0.tar.gz
- CharGer-0.5.1.tar.gz
- CharGer-0.5.2.tar.gz


Project link:

- Homepage
- Download