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How to install bwa_pe_tool via python pip




bwa_pe_tool - map PE fastq reads to a reference genome with bwa, it belongs to Classifiers:

- Development Status :: 3 - Alpha
- License :: OSI Approved :: Apache Software License
- Programming Language :: Python :: 2

When you know about this project and you want to new install bwa_pe_tool to support your project or you get trouble as ModuleNotFoundError: No module named "bwa_pe_tool" or ImportError: cannot import name "bwa_pe_tool" in your project, let follow this tutorial to install bwa_pe_tool



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_bwa_pe_tool_env

- Active the virtual environment

test_bwa_pe_tool_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_bwa_pe_tool_env

- Active the virtual environment

source test_bwa_pe_tool_env/bin/active


Step 2: OK, now, let flow below content to start the installation bwa_pe_tool

To install bwa_pe_tool on Windows(CMD):

py -m pip install bwa_pe_tool

To install bwa_pe_tool on Unix/macOs:

pip install bwa_pe_tool


Step 3: If you want to install a specific bwa_pe_tool version, add ==<bwa_pe_tool version> to the end command line

Example:

pip install bwa_pe_tool==0.1


Please see the version list below table:

VersionReleased dateCommand
bwa_pe_tool 0.62016-07-11T21:47:48Windows:

py -m pip install bwa_pe_tool==0.6

Unix/macOs:

pip install bwa_pe_tool==0.6

bwa_pe_tool 0.52016-07-11T21:36:40Windows:

py -m pip install bwa_pe_tool==0.5

Unix/macOs:

pip install bwa_pe_tool==0.5

bwa_pe_tool 0.42016-07-11T20:43:33Windows:

py -m pip install bwa_pe_tool==0.4

Unix/macOs:

pip install bwa_pe_tool==0.4

bwa_pe_tool 0.32016-06-29T17:54:49Windows:

py -m pip install bwa_pe_tool==0.3

Unix/macOs:

pip install bwa_pe_tool==0.3

bwa_pe_tool 0.22016-06-29T00:14:07Windows:

py -m pip install bwa_pe_tool==0.2

Unix/macOs:

pip install bwa_pe_tool==0.2

bwa_pe_tool 0.12016-06-28T23:38:21Windows:

py -m pip install bwa_pe_tool==0.1

Unix/macOs:

pip install bwa_pe_tool==0.1


Step 4: Otherwise, you can install bwa_pe_tool from local archives:

Download the distribution file from bwa_pe_tool-0.6.tar.gz or the specific bwa_pe_tool version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_bwa_pe_tool_downloaded_file>

On Unix/macOs:

pip install <path_to_bwa_pe_tool_downloaded_file>


List distribution:

- bwa_pe_tool-0.1-py2.py3-none-any.whl
- bwa_pe_tool-0.2-py2.py3-none-any.whl
- bwa_pe_tool-0.3-py2.py3-none-any.whl
- bwa_pe_tool-0.4.tar.gz
- bwa_pe_tool-0.5.tar.gz
- bwa_pe_tool-0.6.tar.gz


Project link:

- Homepage