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How to install scArchest via python pip




scArchest - Transfer learning with Architecture Surgery on Single-cell data, it belongs to Classifiers:

- Environment :: Console
- Framework :: Jupyter
- Intended Audience :: Developers
- Intended Audience :: Science/Research
- Natural Language :: English
- Operating System :: MacOS
- Operating System :: MacOS :: MacOS X
- Operating System :: Microsoft
- Operating System :: Microsoft :: Windows
- Operating System :: POSIX
- Operating System :: POSIX :: Linux

When you know about this project and you want to new install scArchest to support your project or you get trouble as ModuleNotFoundError: No module named "scArchest" or ImportError: cannot import name "scArchest" in your project, let follow this tutorial to install scArchest



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_scArchest_env

- Active the virtual environment

test_scArchest_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_scArchest_env

- Active the virtual environment

source test_scArchest_env/bin/active


Step 2: OK, now, let flow below content to start the installation scArchest

To install scArchest on Windows(CMD):

py -m pip install scArchest

To install scArchest on Unix/macOs:

pip install scArchest


Step 3: If you want to install a specific scArchest version, add ==<scArchest version> to the end command line

Example:

pip install scArchest==0.0.0


Please see the version list below table:

VersionReleased dateCommand
scArchest 0.0.12020-09-21T05:18:26Windows:

py -m pip install scArchest==0.0.1

Unix/macOs:

pip install scArchest==0.0.1

scArchest 0.0.02020-09-20T08:16:57Windows:

py -m pip install scArchest==0.0.0

Unix/macOs:

pip install scArchest==0.0.0


Step 4: Otherwise, you can install scArchest from local archives:

Download the distribution file from scArchest-0.0.1.tar.gz or the specific scArchest version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_scArchest_downloaded_file>

On Unix/macOs:

pip install <path_to_scArchest_downloaded_file>


List distribution:


Project link:

- Homepage