How to install PyNCBI via python pip

- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Information Analysis

When you know about this project and you want to new install PyNCBI to support your project or you get trouble as ModuleNotFoundError: No module named "PyNCBI" or ImportError: cannot import name "PyNCBI" in your project, let follow this tutorial to install PyNCBI

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel

py -m pip install --user virtualenv

py -m venv test_PyNCBI_env

test_PyNCBI_env\Scripts\active

pip3 install virtualenv

python3 -m venv test_PyNCBI_env

source test_PyNCBI_env/bin/active

Step 2: OK, now, let flow below content to start the installation PyNCBI

To install PyNCBI on Windows(CMD):

py -m pip install PyNCBI

To install PyNCBI on Unix/macOs:

pip install PyNCBI

Step 3: If you want to install a specific PyNCBI version, add ==<PyNCBI version> to the end command line

Example:

pip install PyNCBI==0.1.4

Please see the version list below table:

py -m pip install PyNCBI==0.1.6.1

pip install PyNCBI==0.1.6.1

py -m pip install PyNCBI==0.1.5.1

pip install PyNCBI==0.1.5.1

py -m pip install PyNCBI==0.1.4

pip install PyNCBI==0.1.4

Step 4: Otherwise, you can install PyNCBI from local archives:

Download the distribution file from PyNCBI-0.1.6.1.tar.gz or the specific PyNCBI version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_PyNCBI_downloaded_file>

On Unix/macOs:

pip install <path_to_PyNCBI_downloaded_file>

List distribution:

Project link:

- Homepage
- Download