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How to install pyhmmer-sepp via python pip




pyhmmer-sepp - Personal use fork of pyhmmer (Cython bindings and Python interface to HMMER3) for implementing SEPP, it belongs to Classifiers:

- Programming Language :: C
- Programming Language :: Cython
- Programming Language :: Python :: Implementation :: PyPy
- Topic :: Scientific/Engineering :: Bio-Informatics
- Topic :: Scientific/Engineering :: Medical Science Apps.
- Typing :: Typed

When you know about this project and you want to new install pyhmmer-sepp to support your project or you get trouble as ModuleNotFoundError: No module named "pyhmmer-sepp" or ImportError: cannot import name "pyhmmer-sepp" in your project, let follow this tutorial to install pyhmmer-sepp



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_pyhmmer-sepp_env

- Active the virtual environment

test_pyhmmer-sepp_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_pyhmmer-sepp_env

- Active the virtual environment

source test_pyhmmer-sepp_env/bin/active


Step 2: OK, now, let flow below content to start the installation pyhmmer-sepp

To install pyhmmer-sepp on Windows(CMD):

py -m pip install pyhmmer-sepp

To install pyhmmer-sepp on Unix/macOs:

pip install pyhmmer-sepp


Step 3: If you want to install a specific pyhmmer-sepp version, add ==<pyhmmer-sepp version> to the end command line

Example:

pip install pyhmmer-sepp==0.3.0


Please see the version list below table:

VersionReleased dateCommand
pyhmmer-sepp 0.3.42021-04-04T09:13:48Windows:

py -m pip install pyhmmer-sepp==0.3.4

Unix/macOs:

pip install pyhmmer-sepp==0.3.4

pyhmmer-sepp 0.3.32021-04-04T06:51:59Windows:

py -m pip install pyhmmer-sepp==0.3.3

Unix/macOs:

pip install pyhmmer-sepp==0.3.3

pyhmmer-sepp 0.3.02021-04-04T06:18:59Windows:

py -m pip install pyhmmer-sepp==0.3.0

Unix/macOs:

pip install pyhmmer-sepp==0.3.0


Step 4: Otherwise, you can install pyhmmer-sepp from local archives:

Download the distribution file from pyhmmer_sepp-0.3.4.tar.gz or the specific pyhmmer-sepp version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pyhmmer-sepp_downloaded_file>

On Unix/macOs:

pip install <path_to_pyhmmer-sepp_downloaded_file>


List distribution:


Project link:

- Homepage
- Documentation