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How to install pybamview via python pip




pybamview - Python based BAM alignment viewer, it belongs to Classifiers:

- Development Status :: 4 - Beta
- Intended Audience :: Science/Research
- Programming Language :: Python :: 2
- Programming Language :: Python :: 2.6
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics
- Topic :: Scientific/Engineering :: Visualization

When you know about this project and you want to new install pybamview to support your project or you get trouble as ModuleNotFoundError: No module named "pybamview" or ImportError: cannot import name "pybamview" in your project, let follow this tutorial to install pybamview



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_pybamview_env

- Active the virtual environment

test_pybamview_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_pybamview_env

- Active the virtual environment

source test_pybamview_env/bin/active


Step 2: OK, now, let flow below content to start the installation pybamview

To install pybamview on Windows(CMD):

py -m pip install pybamview

To install pybamview on Unix/macOs:

pip install pybamview


Step 3: If you want to install a specific pybamview version, add ==<pybamview version> to the end command line

Example:

pip install pybamview==0.1.0


Please see the version list below table:

VersionReleased dateCommand
pybamview 1.0.82017-02-28T05:32:56Windows:

py -m pip install pybamview==1.0.8

Unix/macOs:

pip install pybamview==1.0.8

pybamview 1.0.72015-11-24T21:13:08Windows:

py -m pip install pybamview==1.0.7

Unix/macOs:

pip install pybamview==1.0.7

pybamview 1.0.62014-09-28T23:36:56Windows:

py -m pip install pybamview==1.0.6

Unix/macOs:

pip install pybamview==1.0.6

pybamview 1.0.52014-08-17T22:19:20Windows:

py -m pip install pybamview==1.0.5

Unix/macOs:

pip install pybamview==1.0.5

pybamview 1.0.42014-08-12T17:54:40Windows:

py -m pip install pybamview==1.0.4

Unix/macOs:

pip install pybamview==1.0.4

pybamview 1.0.32014-07-30T23:06:39Windows:

py -m pip install pybamview==1.0.3

Unix/macOs:

pip install pybamview==1.0.3

pybamview 1.0.22014-07-26T19:32:20Windows:

py -m pip install pybamview==1.0.2

Unix/macOs:

pip install pybamview==1.0.2

pybamview 1.0.12014-07-25T01:43:21Windows:

py -m pip install pybamview==1.0.1

Unix/macOs:

pip install pybamview==1.0.1

pybamview 1.0.02014-07-23T23:45:57Windows:

py -m pip install pybamview==1.0.0

Unix/macOs:

pip install pybamview==1.0.0

pybamview 0.1.42014-05-23T19:30:22Windows:

py -m pip install pybamview==0.1.4

Unix/macOs:

pip install pybamview==0.1.4

pybamview 0.1.32014-05-23T03:11:44Windows:

py -m pip install pybamview==0.1.3

Unix/macOs:

pip install pybamview==0.1.3

pybamview 0.1.22014-05-22T23:18:05Windows:

py -m pip install pybamview==0.1.2

Unix/macOs:

pip install pybamview==0.1.2

pybamview 0.1.12014-05-22T18:16:05Windows:

py -m pip install pybamview==0.1.1

Unix/macOs:

pip install pybamview==0.1.1

pybamview 0.1.02014-05-22T17:24:44Windows:

py -m pip install pybamview==0.1.0

Unix/macOs:

pip install pybamview==0.1.0


Step 4: Otherwise, you can install pybamview from local archives:

Download the distribution file from pybamview-1.0.8.tar.gz or the specific pybamview version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pybamview_downloaded_file>

On Unix/macOs:

pip install <path_to_pybamview_downloaded_file>


List distribution:


Project link:

- Homepage
- Download