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How to install pyBamTools via python pip




pyBamTools - Tools for working on BAM data, it belongs to Classifiers:

- License :: OSI Approved :: GNU General Public License v2 (GPLv2)

When you know about this project and you want to new install pyBamTools to support your project or you get trouble as ModuleNotFoundError: No module named "pyBamTools" or ImportError: cannot import name "pyBamTools" in your project, let follow this tutorial to install pyBamTools



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_pyBamTools_env

- Active the virtual environment

test_pyBamTools_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_pyBamTools_env

- Active the virtual environment

source test_pyBamTools_env/bin/active


Step 2: OK, now, let flow below content to start the installation pyBamTools

To install pyBamTools on Windows(CMD):

py -m pip install pyBamTools

To install pyBamTools on Unix/macOs:

pip install pyBamTools


Step 3: If you want to install a specific pyBamTools version, add ==<pyBamTools version> to the end command line

Example:

pip install pyBamTools==0.0.2


Please see the version list below table:

VersionReleased dateCommand
pyBamTools 0.0.42018-03-30T17:13:51Windows:

py -m pip install pyBamTools==0.0.4

Unix/macOs:

pip install pyBamTools==0.0.4

pyBamTools 0.0.32018-02-28T15:50:52Windows:

py -m pip install pyBamTools==0.0.3

Unix/macOs:

pip install pyBamTools==0.0.3

pyBamTools 0.0.22018-02-15T17:51:00Windows:

py -m pip install pyBamTools==0.0.2

Unix/macOs:

pip install pyBamTools==0.0.2


Step 4: Otherwise, you can install pyBamTools from local archives:

Download the distribution file from pyBamTools-0.0.4.tar.gz or the specific pyBamTools version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_pyBamTools_downloaded_file>

On Unix/macOs:

pip install <path_to_pyBamTools_downloaded_file>


List distribution:


Project link:

- Homepage