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How to install PLoT-ME via python pip




PLoT-ME - Pre-classification of Long-reads for Memory Efficient Taxonomic assignment, it belongs to Classifiers:

- Intended Audience :: Developers
- Intended Audience :: Healthcare Industry
- Intended Audience :: Science/Research
- License :: OSI Approved
- License :: OSI Approved :: MIT License
- Operating System :: POSIX
- Operating System :: POSIX :: Linux
- Operating System :: Unix
- Programming Language :: Python :: 3
- Programming Language :: Python :: 3.7
- Topic :: Database
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install PLoT-ME to support your project or you get trouble as ModuleNotFoundError: No module named "PLoT-ME" or ImportError: cannot import name "PLoT-ME" in your project, let follow this tutorial to install PLoT-ME



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_PLoT-ME_env

- Active the virtual environment

test_PLoT-ME_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_PLoT-ME_env

- Active the virtual environment

source test_PLoT-ME_env/bin/active


Step 2: OK, now, let flow below content to start the installation PLoT-ME

To install PLoT-ME on Windows(CMD):

py -m pip install PLoT-ME

To install PLoT-ME on Unix/macOs:

pip install PLoT-ME


Step 3: If you want to install a specific PLoT-ME version, add ==<PLoT-ME version> to the end command line

Example:

pip install PLoT-ME==0.8.3


Please see the version list below table:

VersionReleased dateCommand
PLoT-ME 0.9.12021-04-22T23:05:40Windows:

py -m pip install PLoT-ME==0.9.1

Unix/macOs:

pip install PLoT-ME==0.9.1

PLoT-ME 0.8.32020-07-08T23:19:29Windows:

py -m pip install PLoT-ME==0.8.3

Unix/macOs:

pip install PLoT-ME==0.8.3


Step 4: Otherwise, you can install PLoT-ME from local archives:

Download the distribution file from PLoT_ME-0.9.1-cp39-cp39-manylinux2014_x86_64.whl or the specific PLoT-ME version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_PLoT-ME_downloaded_file>

On Unix/macOs:

pip install <path_to_PLoT-ME_downloaded_file>


List distribution:


Project link:

- Homepage