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How to install OBITools3 via python pip




OBITools3 - A package for the management of analyses and data in DNA metabarcoding., it belongs to Classifiers:

- Development Status :: 4 - Beta
- Environment :: Console
- Intended Audience :: Science/Research
- License :: Other/Proprietary License
- Operating System :: Unix
- Programming Language :: C
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics
- Topic :: Utilities

When you know about this project and you want to new install OBITools3 to support your project or you get trouble as ModuleNotFoundError: No module named "OBITools3" or ImportError: cannot import name "OBITools3" in your project, let follow this tutorial to install OBITools3



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_OBITools3_env

- Active the virtual environment

test_OBITools3_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_OBITools3_env

- Active the virtual environment

source test_OBITools3_env/bin/active


Step 2: OK, now, let flow below content to start the installation OBITools3

To install OBITools3 on Windows(CMD):

py -m pip install OBITools3

To install OBITools3 on Unix/macOs:

pip install OBITools3


Step 3: If you want to install a specific OBITools3 version, add ==<OBITools3 version> to the end command line

Example:

pip install OBITools3==3.0.0b19                                                        pre-release


Please see the version list below table:

VersionReleased dateCommand

Step 4: Otherwise, you can install OBITools3 from local archives:

Download the distribution file from OBITools3-3.0.1b19.tar.gz or the specific OBITools3 version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_OBITools3_downloaded_file>

On Unix/macOs:

pip install <path_to_OBITools3_downloaded_file>


List distribution:

- OBITools3-3.0.0b19.tar.gz
- OBITools3-3.0.0b20-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b20-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b20.tar.gz
- OBITools3-3.0.0b21-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b22-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b22-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b22.tar.gz
- OBITools3-3.0.0b23-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b23-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b23.tar.gz
- OBITools3-3.0.0b24-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b24-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b24.tar.gz
- OBITools3-3.0.0b25-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b25-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b25.tar.gz
- OBITools3-3.0.0b26-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b26.tar.gz
- OBITools3-3.0.0b27-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b27-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b27.tar.gz
- OBITools3-3.0.0b28-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b28-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b28.tar.gz
- OBITools3-3.0.0b29-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b29.tar.gz
- OBITools3-3.0.0b30-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b30.tar.gz
- OBITools3-3.0.0b31-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b31.tar.gz
- OBITools3-3.0.0b32-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b32.tar.gz
- OBITools3-3.0.0b33-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b33.tar.gz
- OBITools3-3.0.0b34-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b34.tar.gz
- OBITools3-3.0.0b36-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b36.tar.gz
- OBITools3-3.0.0b37-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b37.tar.gz
- OBITools3-3.0.0b38-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b38.tar.gz
- OBITools3-3.0.0b39-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b39-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.0b39.tar.gz
- OBITools3-3.0.0b40-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b40.tar.gz
- OBITools3-3.0.0b41-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b41.tar.gz
- OBITools3-3.0.0b42-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b42.tar.gz
- OBITools3-3.0.0b43-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.0b43.tar.gz
- OBITools3-3.0.1b1-cp37-cp37m-macosx_10_9_x86_64.whl
- OBITools3-3.0.1b1-py3.7-macosx-10.9-x86_64.egg
- OBITools3-3.0.1b1-py3.8-linux-x86_64.egg
- OBITools3-3.0.1b1.tar.gz
- OBITools3-3.0.1b2-py3.8-linux-x86_64.egg
- OBITools3-3.0.1b3.tar.gz
- OBITools3-3.0.1b4.tar.gz
- OBITools3-3.0.1b6.tar.gz
- OBITools3-3.0.1b7.tar.gz
- OBITools3-3.0.1b8.tar.gz
- OBITools3-3.0.1b9-py3.8-linux-x86_64.egg
- OBITools3-3.0.1b9.tar.gz
- OBITools3-3.0.1b10.tar.gz
- OBITools3-3.0.1b11-py3.8-linux-x86_64.egg
- OBITools3-3.0.1b11.tar.gz
- OBITools3-3.0.1b12-py3.8-linux-x86_64.egg
- OBITools3-3.0.1b12.tar.gz
- OBITools3-3.0.1b13.tar.gz
- OBITools3-3.0.1b14-1.tar.gz
- OBITools3-3.0.1b15-py3.8-linux-x86_64.egg
- OBITools3-3.0.1b15.tar.gz
- OBITools3-3.0.1b16.tar.gz
- OBITools3-3.0.1b17.tar.gz
- OBITools3-3.0.1b18.tar.gz
- OBITools3-3.0.1b19.tar.gz
- OBITools3-3.0.1b20.tar.gz


Project link:

- Homepage