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How to install goenrichment via python pip




goenrichment - GO enrichment analysis from a list of gene names using a precomputed database, it belongs to Classifiers:

- Framework :: Jupyter
- License :: Public Domain
- Operating System :: Unix
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install goenrichment to support your project or you get trouble as ModuleNotFoundError: No module named "goenrichment" or ImportError: cannot import name "goenrichment" in your project, let follow this tutorial to install goenrichment



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_goenrichment_env

- Active the virtual environment

test_goenrichment_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_goenrichment_env

- Active the virtual environment

source test_goenrichment_env/bin/active


Step 2: OK, now, let flow below content to start the installation goenrichment

To install goenrichment on Windows(CMD):

py -m pip install goenrichment

To install goenrichment on Unix/macOs:

pip install goenrichment


Step 3: If you want to install a specific goenrichment version, add ==<goenrichment version> to the end command line

Example:

pip install goenrichment==0.0.2a3                                                        pre-release


Please see the version list below table:

VersionReleased dateCommand
goenrichment 1.0.32021-11-01T13:58:24Windows:

py -m pip install goenrichment==1.0.3

Unix/macOs:

pip install goenrichment==1.0.3

goenrichment 1.0.22021-05-22T16:30:26Windows:

py -m pip install goenrichment==1.0.2

Unix/macOs:

pip install goenrichment==1.0.2

goenrichment 1.0.12021-03-29T18:17:26Windows:

py -m pip install goenrichment==1.0.1

Unix/macOs:

pip install goenrichment==1.0.1


Step 4: Otherwise, you can install goenrichment from local archives:

Download the distribution file from goenrichment-1.0.3.tar.gz or the specific goenrichment version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_goenrichment_downloaded_file>

On Unix/macOs:

pip install <path_to_goenrichment_downloaded_file>


List distribution:

- goenrichment-0.0.2a3-py2.py3-none-any.whl
- goenrichment-0.0.2a3.tar.gz
- goenrichment-0.0.3a3-py2.py3-none-any.whl
- goenrichment-0.0.3a3.tar.gz
- goenrichment-0.0.4a3-py2.py3-none-any.whl
- goenrichment-0.0.4a3.tar.gz
- goenrichment-0.0.5a3-py2.py3-none-any.whl
- goenrichment-0.0.5a3.tar.gz
- goenrichment-0.0.8a3-py2.py3-none-any.whl
- goenrichment-0.0.8a3.tar.gz
- goenrichment-0.0.9a3-py2.py3-none-any.whl
- goenrichment-0.0.9a3.tar.gz
- goenrichment-0.0.10a3-py3-none-any.whl
- goenrichment-0.0.10a3.tar.gz
- goenrichment-1.0.1-py3-none-any.whl
- goenrichment-1.0.1.tar.gz
- goenrichment-1.0.2-py3-none-any.whl
- goenrichment-1.0.2.tar.gz
- goenrichment-1.0.3-py3-none-any.whl
- goenrichment-1.0.3.tar.gz


Project link:

- Homepage
- Documentation
- Source
- Tracker