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How to install GenBankQC via python pip




GenBankQC - "Automated quality control for GenBank genomes.", it belongs to Classifiers:

- Development Status :: 3 - Alpha
- Environment :: Console
- Intended Audience :: Science/Research
- Operating System :: POSIX
- Operating System :: POSIX :: Linux
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install GenBankQC to support your project or you get trouble as ModuleNotFoundError: No module named "GenBankQC" or ImportError: cannot import name "GenBankQC" in your project, let follow this tutorial to install GenBankQC



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_GenBankQC_env

- Active the virtual environment

test_GenBankQC_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_GenBankQC_env

- Active the virtual environment

source test_GenBankQC_env/bin/active


Step 2: OK, now, let flow below content to start the installation GenBankQC

To install GenBankQC on Windows(CMD):

py -m pip install GenBankQC

To install GenBankQC on Unix/macOs:

pip install GenBankQC


Step 3: If you want to install a specific GenBankQC version, add ==<GenBankQC version> to the end command line

Example:

pip install GenBankQC==0.1a0                                                        pre-release


Please see the version list below table:

VersionReleased dateCommand

Step 4: Otherwise, you can install GenBankQC from local archives:

Download the distribution file from GenBankQC-0.2a0.tar.gz or the specific GenBankQC version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_GenBankQC_downloaded_file>

On Unix/macOs:

pip install <path_to_GenBankQC_downloaded_file>


List distribution:

- GenBankQC-0.1a0.tar.gz
- GenBankQC-0.2a0.tar.gz


Project link:

- Homepage