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How to install gapmm2 via python pip




gapmm2 - gapmm2: gapped alignment using minimap2, it belongs to Classifiers:

- Development Status :: 4 - Beta
- Intended Audience :: Science/Research
- License :: OSI Approved :: BSD License
- Operating System :: Unix
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install gapmm2 to support your project or you get trouble as ModuleNotFoundError: No module named "gapmm2" or ImportError: cannot import name "gapmm2" in your project, let follow this tutorial to install gapmm2



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_gapmm2_env

- Active the virtual environment

test_gapmm2_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_gapmm2_env

- Active the virtual environment

source test_gapmm2_env/bin/active


Step 2: OK, now, let flow below content to start the installation gapmm2

To install gapmm2 on Windows(CMD):

py -m pip install gapmm2

To install gapmm2 on Unix/macOs:

pip install gapmm2


Step 3: If you want to install a specific gapmm2 version, add ==<gapmm2 version> to the end command line

Example:

pip install gapmm2==0.1.0


Please see the version list below table:

VersionReleased dateCommand
gapmm2 0.2.02022-01-27T23:52:11Windows:

py -m pip install gapmm2==0.2.0

Unix/macOs:

pip install gapmm2==0.2.0

gapmm2 0.1.12022-01-27T05:43:45Windows:

py -m pip install gapmm2==0.1.1

Unix/macOs:

pip install gapmm2==0.1.1

gapmm2 0.1.02022-01-26T04:41:55Windows:

py -m pip install gapmm2==0.1.0

Unix/macOs:

pip install gapmm2==0.1.0


Step 4: Otherwise, you can install gapmm2 from local archives:

Download the distribution file from gapmm2-0.2.0.tar.gz or the specific gapmm2 version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_gapmm2_downloaded_file>

On Unix/macOs:

pip install <path_to_gapmm2_downloaded_file>


List distribution:

- gapmm2-0.1.0-py3-none-any.whl (python version >=3.6.0)
- gapmm2-0.1.0.tar.gz (python version >=3.6.0)
- gapmm2-0.1.1-py3-none-any.whl (python version >=3.6.0)
- gapmm2-0.1.1.tar.gz (python version >=3.6.0)
- gapmm2-0.2.0-py3-none-any.whl (python version >=3.6.0)
- gapmm2-0.2.0.tar.gz (python version >=3.6.0)


Project link:

- Homepage