How to install deepTools via python pip

deepTools - Useful tools for exploring deep sequencing data, it belongs to Classifiers:

- Intended Audience :: Science/Research
- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install deepTools to support your project or you get trouble as ModuleNotFoundError: No module named "deepTools" or ImportError: cannot import name "deepTools" in your project, let follow this tutorial to install deepTools

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel

Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_deepTools_env

- Active the virtual environment

test_deepTools_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_deepTools_env

- Active the virtual environment

source test_deepTools_env/bin/active

Step 2: OK, now, let flow below content to start the installation deepTools

To install deepTools on Windows(CMD):

py -m pip install deepTools

To install deepTools on Unix/macOs:

pip install deepTools

Step 3: If you want to install a specific deepTools version, add ==<deepTools version> to the end command line

Example:

pip install deepTools==1.5.6

Please see the version list below table:

Version	Released date	Command
deepTools 3.5.1	2021-03-17T14:49:31	Windows: `py -m pip install deepTools==3.5.1` Unix/macOs: `pip install deepTools==3.5.1`
deepTools 3.5.0	2020-08-21T10:26:48	Windows: `py -m pip install deepTools==3.5.0` Unix/macOs: `pip install deepTools==3.5.0`
deepTools 3.4.3	2020-04-16T14:27:58	Windows: `py -m pip install deepTools==3.4.3` Unix/macOs: `pip install deepTools==3.4.3`
deepTools 3.4.2	2020-04-05T06:56:49	Windows: `py -m pip install deepTools==3.4.2` Unix/macOs: `pip install deepTools==3.4.2`
deepTools 3.4.1	2020-03-15T12:45:46	Windows: `py -m pip install deepTools==3.4.1` Unix/macOs: `pip install deepTools==3.4.1`
deepTools 3.4.0	2020-03-05T14:29:23	Windows: `py -m pip install deepTools==3.4.0` Unix/macOs: `pip install deepTools==3.4.0`
deepTools 3.3.2	2020-01-23T08:20:23	Windows: `py -m pip install deepTools==3.3.2` Unix/macOs: `pip install deepTools==3.3.2`
deepTools 3.3.1	2019-09-10T07:31:02	Windows: `py -m pip install deepTools==3.3.1` Unix/macOs: `pip install deepTools==3.3.1`
deepTools 3.3.0	2019-05-29T08:27:10	Windows: `py -m pip install deepTools==3.3.0` Unix/macOs: `pip install deepTools==3.3.0`
deepTools 3.2.1	2019-04-01T22:09:23	Windows: `py -m pip install deepTools==3.2.1` Unix/macOs: `pip install deepTools==3.2.1`
deepTools 3.2.0	2019-02-18T09:07:10	Windows: `py -m pip install deepTools==3.2.0` Unix/macOs: `pip install deepTools==3.2.0`
deepTools 3.1.3	2018-10-04T21:59:15	Windows: `py -m pip install deepTools==3.1.3` Unix/macOs: `pip install deepTools==3.1.3`
deepTools 3.1.2	2018-08-21T08:50:57	Windows: `py -m pip install deepTools==3.1.2` Unix/macOs: `pip install deepTools==3.1.2`
deepTools 3.1.1	2018-07-27T07:10:44	Windows: `py -m pip install deepTools==3.1.1` Unix/macOs: `pip install deepTools==3.1.1`
deepTools 3.1.0	2018-06-21T12:30:05	Windows: `py -m pip install deepTools==3.1.0` Unix/macOs: `pip install deepTools==3.1.0`
deepTools 3.0.2	2018-04-04T12:05:27	Windows: `py -m pip install deepTools==3.0.2` Unix/macOs: `pip install deepTools==3.0.2`
deepTools 3.0.1	2018-03-02T10:44:45	Windows: `py -m pip install deepTools==3.0.1` Unix/macOs: `pip install deepTools==3.0.1`
deepTools 3.0.0	2018-02-12T14:34:19	Windows: `py -m pip install deepTools==3.0.0` Unix/macOs: `pip install deepTools==3.0.0`
deepTools 2.5.7	2018-02-05T07:33:43	Windows: `py -m pip install deepTools==2.5.7` Unix/macOs: `pip install deepTools==2.5.7`
deepTools 2.5.6	2018-01-28T23:37:45	Windows: `py -m pip install deepTools==2.5.6` Unix/macOs: `pip install deepTools==2.5.6`
deepTools 2.5.5	2018-01-25T07:49:44	Windows: `py -m pip install deepTools==2.5.5` Unix/macOs: `pip install deepTools==2.5.5`
deepTools 2.5.4	2017-11-03T08:43:18	Windows: `py -m pip install deepTools==2.5.4` Unix/macOs: `pip install deepTools==2.5.4`
deepTools 2.5.3	2017-07-24T10:16:25	Windows: `py -m pip install deepTools==2.5.3` Unix/macOs: `pip install deepTools==2.5.3`
deepTools 2.5.2	2017-07-10T14:27:20	Windows: `py -m pip install deepTools==2.5.2` Unix/macOs: `pip install deepTools==2.5.2`
deepTools 2.5.1	2017-05-12T21:42:59	Windows: `py -m pip install deepTools==2.5.1` Unix/macOs: `pip install deepTools==2.5.1`
deepTools 2.5.0.1	2017-04-02T13:20:10	Windows: `py -m pip install deepTools==2.5.0.1` Unix/macOs: `pip install deepTools==2.5.0.1`
deepTools 2.5.0	2017-03-31T09:29:51	Windows: `py -m pip install deepTools==2.5.0` Unix/macOs: `pip install deepTools==2.5.0`
deepTools 2.4.3	2017-03-14T14:08:07	Windows: `py -m pip install deepTools==2.4.3` Unix/macOs: `pip install deepTools==2.4.3`
deepTools 2.4.2	2017-01-13T08:35:18	Windows: `py -m pip install deepTools==2.4.2` Unix/macOs: `pip install deepTools==2.4.2`
deepTools 2.4.1	2016-12-05T09:52:24	Windows: `py -m pip install deepTools==2.4.1` Unix/macOs: `pip install deepTools==2.4.1`
deepTools 2.4.0	2016-11-02T14:24:06	Windows: `py -m pip install deepTools==2.4.0` Unix/macOs: `pip install deepTools==2.4.0`
deepTools 2.3.6	2016-10-19T12:39:10	Windows: `py -m pip install deepTools==2.3.6` Unix/macOs: `pip install deepTools==2.3.6`
deepTools 2.3.5	2016-09-19T13:21:10	Windows: `py -m pip install deepTools==2.3.5` Unix/macOs: `pip install deepTools==2.3.5`
deepTools 2.3.4	2016-08-23T14:50:05	Windows: `py -m pip install deepTools==2.3.4` Unix/macOs: `pip install deepTools==2.3.4`
deepTools 2.3.3	2016-07-28T07:44:48	Windows: `py -m pip install deepTools==2.3.3` Unix/macOs: `pip install deepTools==2.3.3`
deepTools 2.3.2	2016-07-26T09:22:44	Windows: `py -m pip install deepTools==2.3.2` Unix/macOs: `pip install deepTools==2.3.2`
deepTools 2.3.1	2016-07-14T13:26:52	Windows: `py -m pip install deepTools==2.3.1` Unix/macOs: `pip install deepTools==2.3.1`
deepTools 2.3.0	2016-07-13T13:06:06	Windows: `py -m pip install deepTools==2.3.0` Unix/macOs: `pip install deepTools==2.3.0`
deepTools 2.2.4	2016-04-27T14:52:52	Windows: `py -m pip install deepTools==2.2.4` Unix/macOs: `pip install deepTools==2.2.4`
deepTools 2.2.3	2016-04-08T12:23:41	Windows: `py -m pip install deepTools==2.2.3` Unix/macOs: `pip install deepTools==2.2.3`
deepTools 2.2.2	2016-03-08T15:12:23	Windows: `py -m pip install deepTools==2.2.2` Unix/macOs: `pip install deepTools==2.2.2`
deepTools 2.2.1	2016-03-07T15:09:09	Windows: `py -m pip install deepTools==2.2.1` Unix/macOs: `pip install deepTools==2.2.1`
deepTools 2.2.0	2016-03-01T14:24:58	Windows: `py -m pip install deepTools==2.2.0` Unix/macOs: `pip install deepTools==2.2.0`
deepTools 2.1.0	2016-02-11T11:22:18	Windows: `py -m pip install deepTools==2.1.0` Unix/macOs: `pip install deepTools==2.1.0`
deepTools 2.0.1	2016-01-25T15:14:16	Windows: `py -m pip install deepTools==2.0.1` Unix/macOs: `pip install deepTools==2.0.1`
deepTools 1.5.12	2015-11-30T08:08:57	Windows: `py -m pip install deepTools==1.5.12` Unix/macOs: `pip install deepTools==1.5.12`
deepTools 1.5.11	2015-06-08T09:55:41	Windows: `py -m pip install deepTools==1.5.11` Unix/macOs: `pip install deepTools==1.5.11`
deepTools 1.5.10	2015-05-04T14:12:08	Windows: `py -m pip install deepTools==1.5.10` Unix/macOs: `pip install deepTools==1.5.10`
deepTools 1.5.9.1	2014-09-09T13:16:34	Windows: `py -m pip install deepTools==1.5.9.1` Unix/macOs: `pip install deepTools==1.5.9.1`
deepTools 1.5.9	2014-09-08T11:26:09	Windows: `py -m pip install deepTools==1.5.9` Unix/macOs: `pip install deepTools==1.5.9`
deepTools 1.5.8.2	2014-08-22T09:58:24	Windows: `py -m pip install deepTools==1.5.8.2` Unix/macOs: `pip install deepTools==1.5.8.2`
deepTools 1.5.8.1	2014-06-12T08:01:56	Windows: `py -m pip install deepTools==1.5.8.1` Unix/macOs: `pip install deepTools==1.5.8.1`
deepTools 1.5.8	2014-04-02T13:36:56	Windows: `py -m pip install deepTools==1.5.8` Unix/macOs: `pip install deepTools==1.5.8`
deepTools 1.5.7	2014-02-05T14:24:52	Windows: `py -m pip install deepTools==1.5.7` Unix/macOs: `pip install deepTools==1.5.7`
deepTools 1.5.6	2014-01-14T14:04:18	Windows: `py -m pip install deepTools==1.5.6` Unix/macOs: `pip install deepTools==1.5.6`

Step 4: Otherwise, you can install deepTools from local archives:

Download the distribution file from deepTools-3.5.1.tar.gz or the specific deepTools version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_deepTools_downloaded_file>

On Unix/macOs:

pip install <path_to_deepTools_downloaded_file>

List distribution:

Project link:

- Homepage

How to install deepTools via python pip

Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

Step 2: OK, now, let flow below content to start the installation deepTools

Step 3: If you want to install a specific deepTools version, add ==<deepTools version> to the end command line

Step 4: Otherwise, you can install deepTools from local archives:

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