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How to install covest via python pip




covest - Covest estimates the coverage and genome size, just from k-mer abundance histogram computed from DNA sequences reads., it belongs to Classifiers:

- Development Status :: 2 - Pre-Alpha
- License :: OSI Approved :: GNU General Public License v3 (GPLv3)
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install covest to support your project or you get trouble as ModuleNotFoundError: No module named "covest" or ImportError: cannot import name "covest" in your project, let follow this tutorial to install covest



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_covest_env

- Active the virtual environment

test_covest_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_covest_env

- Active the virtual environment

source test_covest_env/bin/active


Step 2: OK, now, let flow below content to start the installation covest

To install covest on Windows(CMD):

py -m pip install covest

To install covest on Unix/macOs:

pip install covest


Step 3: If you want to install a specific covest version, add ==<covest version> to the end command line

Example:

pip install covest==0.1.0


Please see the version list below table:

VersionReleased dateCommand
covest 0.5.62017-01-25T17:40:39Windows:

py -m pip install covest==0.5.6

Unix/macOs:

pip install covest==0.5.6

covest 0.5.52017-01-24T12:33:54Windows:

py -m pip install covest==0.5.5

Unix/macOs:

pip install covest==0.5.5

covest 0.5.42016-07-24T16:42:42Windows:

py -m pip install covest==0.5.4

Unix/macOs:

pip install covest==0.5.4

covest 0.5.32016-07-22T09:10:23Windows:

py -m pip install covest==0.5.3

Unix/macOs:

pip install covest==0.5.3

covest 0.5.22016-06-29T18:19:11Windows:

py -m pip install covest==0.5.2

Unix/macOs:

pip install covest==0.5.2

covest 0.5.12016-06-21T10:00:04Windows:

py -m pip install covest==0.5.1

Unix/macOs:

pip install covest==0.5.1

covest 0.5.02016-06-14T13:38:53Windows:

py -m pip install covest==0.5.0

Unix/macOs:

pip install covest==0.5.0

covest 0.4.42016-06-13T18:33:29Windows:

py -m pip install covest==0.4.4

Unix/macOs:

pip install covest==0.4.4

covest 0.4.32016-06-13T17:03:07Windows:

py -m pip install covest==0.4.3

Unix/macOs:

pip install covest==0.4.3

covest 0.4.22016-05-11T09:47:21Windows:

py -m pip install covest==0.4.2

Unix/macOs:

pip install covest==0.4.2

covest 0.4.12016-05-11T08:04:43Windows:

py -m pip install covest==0.4.1

Unix/macOs:

pip install covest==0.4.1

covest 0.4.02016-05-09T16:49:10Windows:

py -m pip install covest==0.4.0

Unix/macOs:

pip install covest==0.4.0

covest 0.3.02016-04-28T14:19:06Windows:

py -m pip install covest==0.3.0

Unix/macOs:

pip install covest==0.3.0

covest 0.2.02016-04-27T14:59:59Windows:

py -m pip install covest==0.2.0

Unix/macOs:

pip install covest==0.2.0

covest 0.1.12016-04-21T15:03:38Windows:

py -m pip install covest==0.1.1

Unix/macOs:

pip install covest==0.1.1

covest 0.1.02016-04-17T17:28:39Windows:

py -m pip install covest==0.1.0

Unix/macOs:

pip install covest==0.1.0


Step 4: Otherwise, you can install covest from local archives:

Download the distribution file from covest-0.5.6.tar.gz or the specific covest version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_covest_downloaded_file>

On Unix/macOs:

pip install <path_to_covest_downloaded_file>


List distribution:

- covest-0.1.0.tar.gz
- covest-0.1.1.tar.gz
- covest-0.2.0.tar.gz
- covest-0.3.0.tar.gz
- covest-0.4.0.tar.gz
- covest-0.4.1.tar.gz
- covest-0.4.2.tar.gz
- covest-0.4.3.tar.gz
- covest-0.4.4.tar.gz
- covest-0.5.0.tar.gz
- covest-0.5.1.tar.gz
- covest-0.5.2.tar.gz
- covest-0.5.3.tar.gz
- covest-0.5.4.tar.gz
- covest-0.5.5.tar.gz
- covest-0.5.6.tar.gz


Project link:

- Homepage