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How to install bcf-extras via python pip




bcf-extras - A set of variant file helper utilities built on top of bcftools and htslib., it belongs to Classifiers:

- License :: OSI Approved :: GNU General Public License v3 (GPLv3)

When you know about this project and you want to new install bcf-extras to support your project or you get trouble as ModuleNotFoundError: No module named "bcf-extras" or ImportError: cannot import name "bcf-extras" in your project, let follow this tutorial to install bcf-extras



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_bcf-extras_env

- Active the virtual environment

test_bcf-extras_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_bcf-extras_env

- Active the virtual environment

source test_bcf-extras_env/bin/active


Step 2: OK, now, let flow below content to start the installation bcf-extras

To install bcf-extras on Windows(CMD):

py -m pip install bcf-extras

To install bcf-extras on Unix/macOs:

pip install bcf-extras


Step 3: If you want to install a specific bcf-extras version, add ==<bcf-extras version> to the end command line

Example:

pip install bcf-extras==0.1.0


Please see the version list below table:

VersionReleased dateCommand
bcf-extras 0.2.02021-11-30T20:48:45Windows:

py -m pip install bcf-extras==0.2.0

Unix/macOs:

pip install bcf-extras==0.2.0

bcf-extras 0.1.02021-05-03T15:18:00Windows:

py -m pip install bcf-extras==0.1.0

Unix/macOs:

pip install bcf-extras==0.1.0


Step 4: Otherwise, you can install bcf-extras from local archives:

Download the distribution file from bcf_extras-0.2.0.tar.gz or the specific bcf-extras version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_bcf-extras_downloaded_file>

On Unix/macOs:

pip install <path_to_bcf-extras_downloaded_file>


List distribution:

- bcf_extras-0.1.0-py3-none-any.whl (python version ~=3.7)
- bcf_extras-0.1.0.tar.gz (python version ~=3.7)
- bcf_extras-0.2.0-py3-none-any.whl (python version ~=3.7)
- bcf_extras-0.2.0.tar.gz (python version ~=3.7)


Project link:

- Homepage