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How to install aviary-genome via python pip




aviary-genome - aviary - metagenomics pipeline using long and short reads, it belongs to Classifiers:

- Topic :: Scientific/Engineering
- Topic :: Scientific/Engineering :: Bio-Informatics

When you know about this project and you want to new install aviary-genome to support your project or you get trouble as ModuleNotFoundError: No module named "aviary-genome" or ImportError: cannot import name "aviary-genome" in your project, let follow this tutorial to install aviary-genome



Installation:

Step 1: First, ensure you installed pip in your os, to check pip has been installed on your computer

In Windows (CMD):

py -m pip --version

In Unix/macOS:

python3 -m pip --version

Ensure pip, setuptools, and wheel are up to date:

In Windows (CMD):

py -m pip install --upgrade pip setuptools wheel

In Unix/macOS:

python3 -m pip install --upgrade pip setuptools wheel


Optional - If you want to install in virtual environment:

In Windows (CMD):

- Install virtualenv - if you installed it, please ignore

py -m pip install --user virtualenv

- Create a virtual environment

py -m venv test_aviary-genome_env

- Active the virtual environment

test_aviary-genome_env\Scripts\active

In Unix/macOS:

- Install virtualenv - if you installed it, please ignore

pip3 install virtualenv

- Create a virtual environment

python3 -m venv test_aviary-genome_env

- Active the virtual environment

source test_aviary-genome_env/bin/active


Step 2: OK, now, let flow below content to start the installation aviary-genome

To install aviary-genome on Windows(CMD):

py -m pip install aviary-genome

To install aviary-genome on Unix/macOs:

pip install aviary-genome


Step 3: If you want to install a specific aviary-genome version, add ==<aviary-genome version> to the end command line

Example:

pip install aviary-genome==0.4.1


Please see the version list below table:

VersionReleased dateCommand
aviary-genome 0.4.32022-08-03T03:36:00Windows:

py -m pip install aviary-genome==0.4.3

Unix/macOs:

pip install aviary-genome==0.4.3

aviary-genome 0.4.22022-07-22T05:05:37Windows:

py -m pip install aviary-genome==0.4.2

Unix/macOs:

pip install aviary-genome==0.4.2

aviary-genome 0.4.12022-07-18T22:29:19Windows:

py -m pip install aviary-genome==0.4.1

Unix/macOs:

pip install aviary-genome==0.4.1


Step 4: Otherwise, you can install aviary-genome from local archives:

Download the distribution file from aviary-genome-0.4.3.tar.gz or the specific aviary-genome version in the below list of distribution

After that, install by command:

On Windows(CMD):

py -m pip install <path_to_aviary-genome_downloaded_file>

On Unix/macOs:

pip install <path_to_aviary-genome_downloaded_file>


List distribution:

- aviary-genome-0.4.1.tar.gz
- aviary-genome-0.4.2.tar.gz
- aviary_genome-0.4.2-py3-none-any.whl
- aviary-genome-0.4.3.tar.gz
- aviary_genome-0.4.3-py3-none-any.whl
- aviary-genome-0.5.0.tar.gz
- aviary_genome-0.5.0-py3-none-any.whl
- aviary-genome-0.5.1.tar.gz
- aviary_genome-0.5.1-py3-none-any.whl
- aviary-genome-0.5.2.tar.gz
- aviary_genome-0.5.2-py3-none-any.whl
- aviary-genome-0.5.3.tar.gz
- aviary-genome-0.5.4.tar.gz
- aviary-genome-0.5.5.tar.gz
- aviary-genome-0.5.6.tar.gz
- aviary-genome-0.5.7.tar.gz


Project link:

- Homepage